Job Description P16694 Confidence 96.29% Date Thu Jan 5 11:35:44 GMT 2012 Rank 299 Aligned Residues 153 % Identity 21% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	A	I	V	G	T	M	K	A	G	K	S	T	T	I	N	A	I	V	G	T	E	V	L	P	N	R	N	R	P	M	T	A	L	P	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	H	T	P	G	Q	K	E	P	V	L	H	F	S	H	V	A	P	I	D	C	L	I	Q	Q
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation																									.	.	.	.	.	.																																.	.
Template Sequence		V	T	A	L	V	G	P	S	G	S	G	K	S	T	V	L	S	L	L	L	R	L	Y	.	.	.	.	.	.	D	P	A	S	G	T	I	S	L	D	G	H	D	I	R	Q	L	N	P	V	W	L	R	S	K	I	G	T	V	S	Q	.	.	E	P	I	L	F	S	C	S	I	A	E	N	I	A	Y	G	A	D
Template Known Secondary structure									T	T	S	S	S	T							T	T	S	S	.	.	.	.	.	.			S							T	T			T	T	T	B								S						S	.	.	S					S	S	B							T	T	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.																																.	.
Template SS confidence
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.							.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.			.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	R	L	R	D	C	D	I	K	H	L	T	D	V	L	E	I	D	K	D	M	R	A	L	M	Q	R	I	E	N	G	V	A	F	E	K	Y	Y	L	G	A	Q	P	I	F	H	C	L	K	S	L	N	D	L	V	R	L	A	K	A	L	D	V	D	F	P	F	S	A	Y	A	A	I	E	H	I	P	V
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	S	S	V	T	A	E	E	I	Q	R	V	A	E	V	A	N	A	V	A	F	I	R	N	F	P	Q	G	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	T	T	T	S												T	T							T	S	S	S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	V	E	F	V	H	L	A	G	L	E	S	Y	P	G	Q	L	T	L	L	D	T	P	G	P	N	E	A	G	Q	P	H	L	Q	K	M	L	N	Q	Q	L	A	R	A	S	A	V	L	A	V	L	D	Y	T	Q	L	K	S	I	S	D	E	E	V	R	E	A	I	L	A	V	G	Q	S	V	P	L	Y	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	V	G	E	K	G	V	L	L	S	G	G	Q	K	Q	R	I	A	I	A	R	A	L	L	K	N	P	K	I	L	L	L	D	E	A	T	S	A	L	D	A	E	N	E	Y	L	V	Q	E	A	L	D	R	L	M	D	G	R	T	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B		S	S	S	S																						S									S	S																		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
		295	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	A	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		687	.	.	690

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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