Job Description P16694 Confidence 94.55% Date Thu Jan 5 11:35:44 GMT 2012 Rank 397 Aligned Residues 176 % Identity 20% Template c2ph1A_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:nucleotide-binding protein; PDBTitle: crystal structure of nucleotide-binding protein af2382 from2 archaeoglobus fulgidus, northeast structural genomics target gr165 Resolution 2.70 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																			.																.	.	.	.	.	.
Query SS confidence																			.																.	.	.	.	.	.
Query Sequence		N	N	E	L	R	K	I	S	R	L	E	M	V	L	A	I	V	.	G	T	M	K	A	G	K	S	T	T	I	N	A	I	V	.	.	.	.	.	.	G	T	E	V	L	P	N	R	N	R	P	M	T	A	L	P	T	L	I	R	H	T	P	G	Q	K	E	P	V	L	H	F	S	H	V	A	P	I	D	C	L
Query Conservation																			.																.	.	.	.	.	.
Alig confidence																			.																.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	I	K	E	R	L	G	K	I	K	S	R	I	A	V	X	S	G	K	G	G	V	G	K	S	T	V	T	A	L	L	A	V	H	Y	A	R	Q	G	K	K	V	G	I	L	D	A	D	F	L	G	P	S	I	P	I	L	F	G	L	R	N	A	R	I	A	V	S	A	E	G	L	E	P	V	L	T	Q	K
Template Known Secondary structure									T	T		S								S	S	S		T	T															T	T										S	S								T	T			S							T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	Q	L	Q	Q	R	L	R	D	C	D	I	K	H	L	T	D	V	L	E	I	D	K	D	M	R	A	L	M	Q	R	I	E	N	G	V	A	F	E	K	Y	Y	L	G	A	Q	P	I	F	H	C	L	K	S	L	N	D	L	V	R	L	A	K	A	L	D	V	D	F	P	F	S	A	Y	A	A	I	E	H
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	I	K	V	X	S	X	Q	F	L	L	P	K	E	N	T	P	V	I	W	R	G	P	L	I	A	G	X	I	R	E	F	L	G	R	V	A	W	G	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T							G	G	G	G	S	T	T		S	S						S													S	B				S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		I	P	V	I	E	V	E	F	V	H	L	A	G	L	E	S	Y	P	G	Q	L	T	L	L	D	T	.	P	G	P	N	E	A	G	Q	P	H	L	Q	K	M	L	N	Q	Q	L	A	R	A	S	A	V	L	A	V	L	D	Y	T	Q	L	K	S	I	S	D	E	E	V	R	E	A	I	L	A	V	G	Q	S	V
Query Conservation																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.						.	.	.	.	.	.																																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																																									.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	L	L	I	D	L	P	P	G	T	G	D	.	.	.	.	.	.	A	P	L	T	V	X	Q	D	A	K	P	T	G	V	V	V	V	S	T	P	Q	E	L	T	A	V	I	V	E	K	A	I	N	X	A	E	E	T	N	T	.	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								S	S	S	S	S	.	.	.	.	.	.												S								S	S	S															T	T	T		.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																																									.
Template SS confidence
																					130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.
		291	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Y	V	L	V	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	G	L	V	E	N	X
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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