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Job DescriptionP16694
Confidence97.51%DateThu Jan 5 11:35:44 GMT 2012
Rank220Aligned Residues159
% Identity28%Templatec2cnwF_
PDB info PDB header:signal recognitionChain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SRLEMVLAIVGTMKAGKSTTINAIV. . . . . . GTEVLPNRNRP. . MTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQ
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Template Sequence  EPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQ
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  RLRDCDIKHLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEV
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Template Sequence  AMKARGYD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Query Sequence  EFVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLA. . . . . . . . RASAVLAVLDYTQLKSISDEEVREAILAVGQS
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Template Sequence  . . . . . . . . . . . . . . LLFVDTAGRLHTKHNLMEEL. KKVKRAIAKADPEEPKEVWLVLDAV. TGQNGLEQAKKFHEAVGLT
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   187..190.........200...... ...210.........220.........230. ........240.........250
 
   290.........300.........310.....
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Query Sequence  VPLYVLVNKFDQQDRNSDDADQVRAL
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Template Sequence  . . . GVIVTKLDGTAKGGVLIPIVRTL
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   251........260.........270...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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