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Job DescriptionP16694
Confidence99.34%DateThu Jan 5 11:35:44 GMT 2012
Rank36Aligned Residues153
% Identity21%Templatec2bvnB_
PDB info PDB header:elongation factorChain: B: PDB Molecule:elongation factor tu; PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic2 enacyloxin iia
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100.........110.........120.........130.........140.....
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Query Sequence  SRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIK
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Template Sequence  TKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGARGITINTSHVEYDTPTRH. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   8.10.........20.........30.........40.........50.........
 
   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  HLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGL
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   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  ESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRN
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Template Sequence  . . . . . . YAHVDCPGH. . . . . ADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVP. YIIVFLNKCD. MVDD
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S.....GGGTT
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   76...80.... .....90.........100.........110.........120........ .130........ .140..
 
   306...310.........320......... 330.........
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Query Sequence  SDDADQVRALISGTLMKGCITPQQ. . IFPVSSMWGY
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Template Sequence  EELLELVEMEVRELLSQYDFPGDDTPIVRGSALKAL
Template Known Secondary structure  TTS
TTT



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   143......150.........160.........170........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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