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Job DescriptionP16694
Confidence97.68%DateThu Jan 5 11:35:44 GMT 2012
Rank203Aligned Residues142
% Identity23%Templatec2bovA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ras-related protein ral-a; PDBTitle: molecular recognition of an adp-ribosylating clostridium2 botulinum c3 exoenzyme by rala gtpase
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120.........130.........140.........
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Query Sequence  MVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTD
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Template Sequence  HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   15....20.........30.........40.........50.........60..
 
   150.........160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  VLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYP
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   230.........240.........250.........260.........270.........280.........290 .........300......
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Query Sequence  GQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSV. . . PLYVLVNKFDQQDRNS
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Template Sequence  . QIDILDTAGQED. . . . . YAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQ
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GGG

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   63......70.... .....80.........90.........100.........110.........120.........130......
 
   307..310.........320.........330......
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Query Sequence  DDADQVRALISGTLMKGCITPQQIFPVSSM
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Template Sequence  VSVEEAKNRAEQWNVN. . . . . . . YVETSAK
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   137..140.........150.. .......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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