Return to main results Retrieve Phyre Job Id

Job DescriptionP16694
Confidence99.07%DateThu Jan 5 11:35:44 GMT 2012
Rank68Aligned Residues141
% Identity22%Templatec1lnzA_
PDB info PDB header:cell cycleChain: A: PDB Molecule:spo0b-associated gtp-binding protein; PDBTitle: structure of the obg gtp-binding protein
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100........ .110.........120.........130.........140.........
Predicted Secondary structure 


















..















Query SS confidence 




































. .








































Query Sequence  LAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTL. . IRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTD
Query Conservation 


 
  












   

      
     ..
                                        
Alig confidence 




































..







.................................
Template Conservation 




 












 

 


  




 
 

 
   
   .................................
Template Sequence  VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGXVETDDGRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSTTSSS

SSTTSS





SSS
.................................
Template Predicted Secondary structure 

















.................................
Template SS confidence 















































































   161........170.........180.........190.........200.......
 
   150.........160.........170.........180.........190.........200.........210.........220.........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  VLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYP
Query Conservation                                                                         
        
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   230.........240 .........250.........260.........270.........280... ......290.........300
Predicted Secondary structure 





..














.......






Query SS confidence 










. .










































. . . . . . .
















Query Sequence  GQLTLLDTPGP. . NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAI. . . . . . . LAVGQSVPLYVLVNKFD
Query Conservation    
 


 

 ..                     
  
                  .......           
 

 
Alig confidence  ..








..










































.......
















Template Conservation  ..  
 
 


   
     
    
  
 
   

 


               
  

      
  

 





 
Template Sequence  . . FVXADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDXSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKXD
Template Known Secondary structure  ..TT
TTTT

SS
SS


S
SSTTTS
B
B
TT
Template Predicted Secondary structure  ..


























Template SS confidence 















































































   208.210.........220.........230.........240.........250.........260.........270.........280.....
 
   301........310.........320.........330......
Predicted Secondary structure 













Query SS confidence 



































Query Sequence  QQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSM
Query Conservation                     
         
   
  
Alig confidence 


.........























Template Conservation 
  .........    
  
   
     

 


 
Template Sequence  XPE. . . . . . . . . AAENLEAFKEKLTDDYPVFPISAV
Template Known Secondary structure  STT.........

S


B


SS
Template Predicted Secondary structure 


.........






Template SS confidence 



































   286.. .290.........300.........310..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions