Return to main results Retrieve Phyre Job Id

Job DescriptionP76507
Confidence16.97%DateThu Jan 5 12:23:44 GMT 2012
Rank4Aligned Residues59
% Identity7%Templated3d24a1
SCOP infoNuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain
Resolution2.11

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260 .........270.........280.........290.........300.........310...
Predicted Secondary structure 



.






















Query SS confidence 








.




















































Query Sequence  YKMPSYVDD. KCVGLDAWGNKFDISFGATPTEVGTECFESHKDETFSNALFLLVSKPSTIFKL
Query Conservation 


 



 . 
 
  

 
 
      
         

     
  

 


 

   


Alig confidence 








.














..


















.















Template Conservation    
  
 
   
  




 
  
 ..   
     
   
     . 
         
   
Template Sequence  RRLQALRLEREEYVLLKALALANSD. . SVHIEDAEAVEQLREALHE. ALLEYEAGERRRAGRL
Template Known Secondary structure  TTT

T

..
TT
S
.T

Template Predicted Secondary structure 






..





.



Template SS confidence 






























































   314.....320.........330........ .340.........350....... ..360.........370...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions