Job Description P76507 Confidence 3.24% Date Thu Jan 5 12:23:44 GMT 2012 Rank 70 Aligned Residues 109 % Identity 15% Template d1nava_ SCOP info Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Resolution 2.50

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.										.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.										.
Query Sequence		D	R	H	K	L	I	I	K	S	V	I	C	V	V	C	L	L	A	S	I	F	A	I	S	Y	S	K	G	V	V	E	L	N	K	Y	H	A	T	Y	F	G	S	Y	L	Y	M	K	N	N	G	.	.	.	.	.	.	.	.	.	Y	K	M	P	S	Y	V	D	D	.	K	C	V	G	L	D	A	W	G	N	K
Query Conservation																																																				.	.	.	.	.	.	.	.	.										.
Alig confidence																																																				.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		E	D	Q	I	I	L	L	K	G	C	C	M	E	I	M	S	L	R	A	A	V	R	Y	D	P	E	S	D	T	L	T	L	S	G	E	M	A	V	K	R	E	Q	L	K	N	G	G	L	G	V	V	S	D	A	I	F	E	L	G	K	S	L	S	A	F	N	L	D	D	T	E	V	A	L	L	Q	A	V	L	L
Template Known Secondary structure																							T		B	T	T	T	T					T	T	T											T	T	T	T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.						.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		F	D	I	S	F	G	A	T	P	T	E	V	G	T	E	C	F	E	S	H	K	D	E	T	F	S	N	A	L	F	L	L	V	.	.	.	.	.	S	K	P	S	T	I	F	K	L	P
Query Conservation																																			.	.	.	.	.
Alig confidence						.	.																.	.											.	.	.	.	.
Template Conservation						.	.																.	.
Template Sequence		M	S	T	D	.	.	R	S	G	L	L	C	V	D	K	I	E	K	S	Q	E	.	.	A	Y	L	L	A	F	E	H	Y	V	N	H	R	K	H	N	I	P	H	F	W	P	K	L	L
Template Known Secondary structure		S				.	.	S	S	S		S											.	.																S	S	T	T
Template Predicted Secondary structure						.	.																.	.
Template SS confidence
		325	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions