Job Description P76507 Confidence 3.88% Date Thu Jan 5 12:23:44 GMT 2012 Rank 37 Aligned Residues 108 % Identity 13% Template d1dkfb_ SCOP info Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Resolution 2.50

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.										.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.										.
Query Sequence		R	H	K	L	I	I	K	S	V	I	C	V	V	C	L	L	A	S	I	F	A	I	S	Y	S	K	G	V	V	E	L	N	K	Y	H	A	T	Y	F	G	S	Y	L	Y	M	K	N	N	G	.	.	.	.	.	.	.	.	.	Y	K	M	P	S	Y	V	D	D	.	K	C	V	G	L	D	A	W	G	N	K	F
Query Conservation																																																			.	.	.	.	.	.	.	.	.										.
Alig confidence																																																			.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		D	Q	I	T	L	L	K	A	A	C	L	D	I	L	I	L	R	I	C	T	R	Y	T	P	E	Q	D	T	M	T	F	S	D	G	L	T	L	N	R	T	Q	M	H	N	A	G	F	G	P	L	T	D	L	V	F	A	F	A	N	Q	L	L	P	L	E	M	D	D	A	E	T	G	L	L	S	A	I	C	L	I
Template Known Secondary structure																					T	T			T	T	T	T					T	T	S	B											T	T	G	G	G											T	G	G	G	T															S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.						.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		D	I	S	F	G	A	T	P	T	E	V	G	T	E	C	F	E	S	H	K	D	E	T	F	S	N	A	L	F	L	L	V	.	.	.	.	.	S	K	P	S	T	I	F	K	L	P
Query Conservation																																		.	.	.	.	.
Alig confidence					.	.														.	.													.	.	.	.	.
Template Conservation					.	.														.	.
Template Sequence		C	G	D	.	.	R	Q	D	L	E	Q	P	D	R	V	D	M	L	.	.	Q	E	P	L	L	E	A	L	K	V	Y	V	R	K	R	R	P	S	R	P	H	M	F	P	K	M	L
Template Known Secondary structure			T	T	.	.	S	T	T		S									.	.																S	T	T		T	T
Template Predicted Secondary structure					.	.														.	.
Template SS confidence
		336	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions