Return to main results Retrieve Phyre Job Id

Job DescriptionP76507
Confidence7.08%DateThu Jan 5 12:23:44 GMT 2012
Rank17Aligned Residues58
% Identity17%Templatec3rkoF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110. ........120.........130.........140.......
Predicted Secondary structure  ..........
Query SS confidence 





















. . . . . . . . . .



































Query Sequence  LDARVLSLFLKVIYIYSLYAIF. . . . . . . . . . TSYIKTERYVTLFTFFILAFLMCSSSTLSMFASFYQ
Query Conservation 



 

 

 



 




 ..........  
    
    


 
   

 
 


 





 
Alig confidence 





















..........



































Template Conservation 
 
 


  








 








                                        
Template Sequence  LGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILG
Template Known Secondary structure  TT
T

SSTTTT
STT
Template Predicted Secondary structure 












Template SS confidence 



































































   46...50.........60.........70.........80.........90.........100.........110...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions