Job Description P76507 Confidence 96.46% Date Thu Jan 5 12:23:44 GMT 2012 Rank 1 Aligned Residues 221 % Identity 14% Template c3rceA_ PDB info PDB header:transferase/peptide Chain: A: PDB Molecule:oligosaccharide transferase to n-glycosylate proteins; PDBTitle: bacterial oligosaccharyltransferase pglb Resolution 3.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		N	K	A	I	K	V	S	L	Y	I	S	F	V	L	I	I	C	A	L	S	K	N	I	.	.	.	.	M	M	L	N	T	S	D	F	G	R	A	I	K	P	L	I	E	D	I	P	A	F	T	Y	D	L	P	L	L	Y	K	L	K	G	H	I	D	S	I	D	S	Y	E	Y	I	S	S	Y	S	Y	I	L	Y
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.																																															.
Template Conservation																																																																											.
Template Sequence		N	N	S	I	K	Y	T	C	I	L	I	L	I	A	F	A	F	S	V	L	C	R	L	Y	W	V	A	W	A	S	E	F	Y	E	F	F	F	N	D	Q	L	M	I	T	T	N	D	G	Y	A	F	A	E	G	A	R	D	M	I	A	G	F	H	Q	P	N	D	L	S	Y	F	G	S	.	S	L	S	T	L	T
Template Known Secondary structure																								T							S	S		G	G	G			T	T					S																	S				T	T	S				T	T		.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		T	Y	V	L	F	I	S	I	F	T	E	Y	L	D	A	R	V	L	S	L	F	L	K	V	I	Y	I	Y	S	L	Y	A	I	F	T	S	Y	I	K	T	E	R	Y	V	T	L	F	T	F	F	I	L	A	F	L	M	C	S	S	S	T	L	S	M	F	A	S	F	Y	.	.	.	.	Q	E	Q	I	V	I	I
Query Conservation																																																																							.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		Y	W	L	Y	S	I	L	P	F	S	F	E	S	I	I	L	Y	M	S	T	F	F	A	S	L	I	V	V	P	I	I	L	I	A	R	E	Y	K	L	T	T	.	.	.	.	.	.	.	Y	G	F	I	A	A	L	L	G	S	I	A	N	S	Y	Y	N	R	T	M	S	G	Y	Y	D	T	D	M	L	V	L	V
Template Known Secondary structure							S		S	S														G	G	G	G											T	T				.	.	.	.	.	.	.										T	T	S						T	S	S	T	T			S	G	G	G	G	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		154	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		F	L	P	F	L	V	Y	S	L	T	C	K	.	.	.	.	N	N	K	S	M	L	L	L	F	F	S	L	L	I	I	S	T	A	K	N	Q	F	I	L	T	P	L	I	V	Y	S	Y	Y	I	F	F	D	R	H	K	L	I	I	K	S	V	I	C	V	V	C	L	L	A	S	I	F	A	I	S	Y	S	K	G
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		L	P	M	L	I	L	L	T	F	I	R	L	T	I	N	K	D	I	F	T	L	L	L	S	P	I	F	I	M	I	Y	L	W	W	Y	P	S	S	Y	S	L	N	F	A	M	I	G	L	F	G	L	Y	T	L	V	F	H	R	K	E	K	I	F	Y	L	A	I	A	L	M	I	I	A	L	S	M	L	A	W	Q
Template Known Secondary structure																			T																S		G	G	G																				T	T																S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		230
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		242

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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