Job Description P76507 Confidence 3.85% Date Thu Jan 5 12:23:44 GMT 2012 Rank 38 Aligned Residues 60 % Identity 5% Template c3l0jA_ PDB info PDB header:transcription Chain: A: PDB Molecule:nuclear receptor ror-gamma; PDBTitle: crystal structure of orphan nuclear receptor rorgamma in complex with2 natural ligand Resolution 2.40 Å

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		252	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		Y	K	M	P	S	Y	V	D	D	.	K	C	V	G	L	D	A	W	G	N	K	F	D	I	S	F	G	A	T	P	T	E	V	G	T	E	C	F	E	S	H	K	D	E	T	F	S	N	A	L	F	L	L	V	S	K	P	S	T	I	F	K	L
Query Conservation											.
Alig confidence											.																.	.
Template Conservation																											.	.
Template Sequence		H	S	L	S	A	L	H	F	S	E	D	E	I	A	L	Y	T	A	L	V	L	I	N	A	H	.	.	R	P	G	L	Q	E	K	R	K	V	E	Q	L	Q	Y	N	L	E	L	A	F	H	H	H	L	C	K	T	H	R	Q	S	I	L	A	K
Template Known Secondary structure							T	T																	T	T	.	.		T	T		S																							T	T		G	G	G	T	T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.			430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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