 |
| Job Description | P76507 | | Confidence | 2.90% | Date | Thu Jan 5 12:23:44 GMT 2012 |
| Rank | 82 | Aligned Residues | 18 |
| % Identity | 6% | Template | c3iydD_ |
| PDB info |
PDB header:transcription/dna | Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta; |
PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
|
| Resolution | 19.80 Å |
|
| | |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | | | | |
|
|
|
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | K | N | N | G | Y | K | M | P | S | Y | V | D | D | K | C | V | G |
| Query Conservation | |
| | |
| |
|
|
| |
|
|
|
| | |
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
| |
| | | |
|
|
|
|
| | |
|
|
| Template Sequence | |
T | V | G | P | Y | L | R | L | H | Q | C | G | L | P | K | K | M | A |
| Template Known Secondary structure | |
 |  |
| T | T |
|
| T | T | | | | |
| | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
| | |
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
356 | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
