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Job DescriptionP76507
Confidence3.37%DateThu Jan 5 12:23:44 GMT 2012
Rank52Aligned Residues111
% Identity10%Templatec1xdkF_
PDB info PDB header:hormone/growth factor receptorChain: F: PDB Molecule:retinoic acid receptor, beta; PDBTitle: crystal structure of the rarbeta/rxralpha ligand binding2 domain heterodimer in complex with 9-cis retinoic acid and3 a fragment of the trap220 coactivator
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230.........240.........250 .........260 .........270.
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Query Sequence  DRHKLIIKSVICVVCLLASIFAISYSKGVVELNKYHATYFGSYLYMKNN. . . . . . . . . GYKMPSYVDD. KCVGLDAWGNK
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Template Sequence  ADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICL
Template Known Secondary structure  TTTTTT
TT
BTTTGGGGGG


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   248.250.........260.........270.........280.........290.........300.........310.........320.......
 
   272.......280.........290.........300........ .310....
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Query Sequence  FDISFGATPTEVGTECFESHKDETFSNALFLLVSKPS. . . TIFKLP
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Template Sequence  ICGD. . RQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKIL
Template Known Secondary structure  S
S
..SSS
SST
TT
TT
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   328.330. ........340.........350.........360.........370.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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