Job Description P08622 Confidence 100.00% Date Thu Jan 5 11:01:33 GMT 2012 Rank 4 Aligned Residues 168 % Identity 26% Template c2qldA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 1; PDBTitle: human hsp40 hdj1 Resolution 2.70 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	R	Y	N	M	E	L	T	L	E	E	A	V	R	G	V	T	K	E	I	R	I	P	T	L	E	E	C	D	V	C	H	G	S	G	A	K	P	G	T	Q	P	Q	T	C	P	T	C	H	G	S	G	Q	V	Q	M	R	Q	G	F	F	A	V	Q	Q	T	C	P	H	C	Q	G	R	G	T	L	I	K	D
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	T	H	D	L	R	V	S	L	E	E	I	Y	S	G	C	T	K	K	M	K	I	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	N	K	C	H	G	H	G	R	V	E	R	S	K	T	L	S	V	K	I	P	A	G	V	D	T	G	D	R	I	R	L	A	G	E	G	E	A	G	E	H	G	A	P	A	G	D	L	Y	V	Q	V	Q	V	K	Q	H	P	I	F	E	R	E	G	N	N	L	Y	C	E	V	P	I	N	F	A	M	A	A
Query Conservation
Alig confidence																																								.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		K	R	L	N	P	D	G	K	S	I	R	N	E	D	K	I	L	T	I	E	V	K	K	G	W	K	E	G	T	K	I	T	F	P	K	E	G	D	.	.	.	.	Q	T	I	P	A	D	I	V	F	V	L	K	D	K	P	H	N	I	F	K	R	D	G	S	D	V	I	Y	P	A	R	I	S	L	R	E	A	L
Template Known Secondary structure					T	T	T	S	S															T	T			T	T						T	T		S		.	.	.	.																	S	S					T	T
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure															.																												.
Query SS confidence															.																												.
Query Sequence		L	G	G	E	I	E	V	P	T	L	D	G	R	.	V	K	L	K	V	P	G	E	T	Q	T	G	K	L	F	R	M	R	G	K	G	V	K	S	V	R	G	.	G	A	Q	G	D	L	L	C	R	V	V	V	E	T	P	V	G	L	N	E	R	Q	K	Q	L	L	Q
Query Conservation															.																												.
Alig confidence															.																												.
Template Conservation
Template Sequence		C	G	C	T	V	N	V	P	T	L	D	G	R	T	I	P	V	V	F	K	D	V	I	R	P	G	M	R	R	K	V	P	G	E	G	L	P	L	P	K	T	P	E	K	R	G	D	L	I	I	E	F	E	V	I	F	P	E	R	I	P	Q	T	S	R	T	V	L	E
Template Known Secondary structure											T	T	S									S				T	T						T	T		S		B		S	S		T	T	S	B													S										T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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