 |
Job Description | P08622 | Confidence | 99.82% | Date | Thu Jan 5 11:01:33 GMT 2012 |
Rank | 35 | Aligned Residues | 68 |
% Identity | 53% | Template | c2kqxA_ |
PDB info |
PDB header:chaperone binding protein | Chain: A: PDB Molecule:curved dna-binding protein; |
PDBTitle: nmr structure of the j-domain (residues 2-72) in the2 escherichia coli cbpa
|
Resolution | UNK |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | D | Y | Y | E | I | L | G | V | S | K | T | A | E | E | R | E | I | R | K | A | Y | K | R | L | A | M | K | Y | H | P | D | R | N | Q | G | D | K | E | A | E | A | K | F | K | E | I | K | E | A | Y | E | V | L | T | D | S | Q | K | R | A | A | Y | D | Q | Y | G | H | A |
Query Conservation |   |
  |
|
|
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|   |   |
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
Template Sequence |   |
K | D | Y | Y | A | I | M | G | V | K | P | T | D | D | L | K | T | I | K | T | A | Y | R | R | L | A | R | K | Y | H | P | D | V | S | K | . |
E | P | D | A | E | A | R | F | K | E | V | A | E | A | W | E | V | L | S | D | E | Q | R | R | A | E | Y | D | Q | M | W | Q | H |
Template Known Secondary structure |   |
|
|  |  |  |  | T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
| . | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|