Job Description P08622 Confidence 100.00% Date Thu Jan 5 11:01:33 GMT 2012 Rank 1 Aligned Residues 219 % Identity 28% Template c1nltA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:mitochondrial protein import protein mas5; PDBTitle: the crystal structure of hsp40 ydj1 Resolution 2.70 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		A	A	R	G	A	D	L	R	Y	N	M	E	L	T	L	E	E	A	V	R	G	V	T	K	E	I	R	I	P	T	L	E	E	C	D	V	C	H	G	S	G	A	K	P	G	T	Q	P	Q	T	C	P	T	C	H	G	S	G	Q	V	Q	M	R	.	.	.	.	Q	G	F	F	A	V	Q	Q	T	C	P	H	C
Query Conservation																																																																	.	.	.	.
Alig confidence																																																.																	.	.	.	.
Template Conservation																																																.
Template Sequence		P	Q	R	G	K	D	I	K	H	E	I	S	A	S	L	E	E	L	Y	K	G	R	T	A	K	L	A	L	N	K	Q	I	L	C	K	E	C	E	G	R	G	G	K	K	G	A	.	V	K	K	C	T	S	C	N	G	Q	G	I	K	F	V	T	R	Q	M	G	P	M	I	Q	R	F	Q	T	E	C	D	V	C
Template Known Secondary structure				B												T	T																			T	T	T	T	T		S	B	S	T	T	T	.					T	T	S	S	S	S	S								S	S	S								S		T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		Q	G	R	G	T	L	I	K	D	P	.	.	C	N	K	C	H	G	H	G	R	V	E	R	S	K	T	L	S	V	K	I	P	A	G	V	D	T	G	D	R	I	R	L	A	G	E	G	E	A	G	E	H	G	A	P	A	G	D	L	Y	V	Q	V	Q	V	K	Q	H	P	I	F	E	R	E	G	N	N	L	Y
Query Conservation												.	.
Alig confidence												.	.																																									.
Template Conservation																																																						.
Template Sequence		H	G	T	G	D	I	I	D	P	K	D	R	C	K	S	C	N	G	K	K	V	E	N	E	R	K	I	L	E	V	H	V	E	P	G	M	K	D	G	Q	R	I	V	F	K	G	E	A	D	Q	A	P	.	D	V	I	P	G	D	V	V	F	I	V	S	E	R	P	H	K	S	F	K	R	D	G	D	D	L	V
Template Known Secondary structure		S	S	S	S	S				T	T	S	B		S	S	S	T	T	S															T	T			T	T						T	T		S				T	.	T		B														S	S					T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																										.									.	.
Query SS confidence																										.									.	.
Query Sequence		C	E	V	P	I	N	F	A	M	A	A	L	G	G	E	I	E	V	P	T	L	D	G	R	.	V	K	L	K	V	P	G	E	.	.	T	Q	T	G	K	L	F	R	M	R	G	K	G	V	K	S	V	R	G	G	A	Q	G	D	L	L	C	R	V	V	V	E	T	P	V
Query Conservation																										.									.	.
Alig confidence																										.									.	.
Template Conservation
Template Sequence		Y	E	A	E	I	D	L	L	T	A	I	A	G	G	E	F	A	L	E	H	V	S	G	D	W	L	K	V	G	I	V	P	G	E	V	I	A	P	G	M	R	K	V	I	E	G	K	G	M	P	I	P	K	Y	G	G	Y	G	N	L	I	I	K	F	T	I	K	D	P	E
Template Known Secondary structure															B							S	S	S							B		T	T	T	T		S	T	T						T	T		S		B		S	S	S		S	B
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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