 |
| Job Description | P0AG00 | | Confidence | 7.26% | Date | Thu Jan 5 11:27:42 GMT 2012 |
| Rank | 55 | Aligned Residues | 25 |
| % Identity | 16% | Template | c2wwbC_ |
| PDB info |
PDB header:ribosome | Chain: C: PDB Molecule:protein transport protein sec61 subunit beta; |
PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome
|
| Resolution | 6.48 Å |
|
| | |
312 | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|  | | | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
E | E | P | V | K | R | D | S | P | R | R | A | F | L | M | I | M | W | G | I | V | G | G | L | I |
| Query Conservation | |
| |
| | |
| | |
| | | |
|
|
| |
| | |
|
|
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
| |
| | |
|
|
|
|
|
| |
|
| | |
| | |
| Template Sequence | |
D | S | P | G | L | K | V | G | P | V | P | V | L | V | M | S | L | L | F | I | A | S | V | F | M |
| Template Known Secondary structure | |
| S |
|
|
|
|
| S | S |
| S | | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
| | | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
