|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | G | I | V | G | A | I | A | Q | R | D | V | A | E | I | L | L | E | G | L | R | R | L | E | Y | R | G | . |
. |
. |
. |
. |
. |
Y | D | S | A | G | L | A | V | V | D | A | E | G | H | M | T | R | L | R | R | L | G | K | V | . |
. |
Q | M | L | A | Q | A | A | E | E | H | P | L | H | G | G | T | G | I | A | H | T |
Query Conservation |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
| . | . | . | . | . | . |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |   |   |
|   | . | . |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |   | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
Template Sequence |   |
C | E | L | L | G | M | S | A | N | V | P | T | . |
. |
D | I | V | F | S | F | T | G | L | M | Q | R | G | G | G | T | G | P | H | R | D | G | W | G | I | A | F | Y | E | . |
G | R | G | V | R | L | F | Q | D | P | L | A | S | V | D | S | E | V | A | R | L | V | Q | R | F | P | I | K | S | E | T | V | I | G | H | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |
|  |  |  |  |
|
|
|
|
|
| S | S | S | S | S | S | S | B |
|  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |
| S | B | S | S |
|
|  |  |  |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | |
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
R | W | A | T | H | G | E | P | S | E | V | N | A | H | P | H | V | S | . |
. |
. |
. |
E | H | I | V | V | V | H | N | G | I | I | E | N | H | E | P | L | R | E | E | L | K | A | R | G | Y | T | F | V | S | E | T | D | T | E | V | I | A | H | L | V | N | W | E | L | K | Q | G | G | T | . |
. |
. |
. |
. |
. |
. |
L |
Query Conservation |   |
|   |
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |   | . | . | . | . |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
Template Conservation |   |
|   |
|
|   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
| . | . | . | . | . |   |
|
|
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | Q | A | N | V | G | K | V | G | L | S | N | T | H | P | F | I | R | E | L | G | G | R | Y | W | T | F | A | H | N | G | Q | L | A | D | F | Q | P | K | P | G | F | Y | R | P | V | G | . |
. |
. |
. |
. |
E | T | D | S | E | A | A | F | C | D | L | L | N | R | V | R | R | A | F | P | E | P | V | P | V | E | V | L |
Template Known Secondary structure |   |
 |  |
|
|
| S |
|
| S | G | G | G |
| S |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S |
| B | S | S |
|
|
|
|
|
| S | S |
|
| S | S | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | A | V | L | R | A | I | P | Q | L | R | G | A | Y | G | T | V | I | M | D | S | R | H | P | D | T | L | L | A | A | R | S | G | S | P | L | V | I | G | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | G | E | N | F | I | A | S | D | Q | L | A | L | L |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
| . | . | . |
|
Template Sequence |   |
L | P | V | L | I | S | A | C | D | E | Y | R | K | K | G | V | F | N | A | L | I | S | D | G | . |
D | W | L | F | T | F | C | S | S | K | L | A | Y | I | T | R | R | A | P | F | G | P | A | R | L | K | D | A | D | L | T | V | D | F | H | A | E | T | T | P | D | D | V | V | T | V | I | A | T | E | P | . |
. |
. |
L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | B |
|
|  |  |  |  |  | S | S | . | S |
|  |  |  |  |
| S | S |
|  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |
| S | S |  |  |  |  |  |
|
|
| S | S | T | T |
|  |  |  |  |  |  | S | S |
| . | . | . | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
. | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
|
230 |
  |
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | T | R | R | F | I | F | L | E | E | G | D | I | A | E | I | T | R | R | S | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |
|
Template Sequence |   |
T | D | N | E | N | W | T | L | Q | Q | S | G | E | W | V | L | W | W | G | G | E | V |
Template Known Secondary structure |   |
S | S | S | S | S |
|  |  |  |
| T | T |
|  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
  |