Job Description P17169 Confidence 100.00% Date Thu Jan 5 11:36:02 GMT 2012 Rank 5 Aligned Residues 351 % Identity 18% Template c3odpA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative tagatose-6-phosphate ketose/aldose isomerase; PDBTitle: crystal structure of a putative tagatose-6-phosphate ketose/aldose2 isomerase (nt01cx_0292) from clostridium novyi nt at 2.35 a3 resolution Resolution 2.35 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	A	G	D	K	G	I	Y	R	H	Y	M	Q	K	E	I	Y	E	Q	P	N	A	I	K	N	T	L	T	G	R	I	S	H	G	Q	V	D	L	S	E	L	G	P	N	A	D	E	L	L	S	K	V	E	H	I	Q	I	L	A	C	G	T	S	Y	N	S	G	M	V	S	R	Y	W	F	E	S	L	A	G
Query Conservation
Alig confidence											.	.																			.																			.	.
Template Conservation											.	.																			.																			.	.
Template Sequence		D	Y	L	K	E	R	K	G	Y	.	.	I	T	A	K	E	I	C	N	Q	P	K	L	W	R	E	T	Y	E	.	I	I	L	S	Q	R	E	K	L	K	S	F	L	D	N	F	A	K	.	.	K	P	N	A	K	I	V	I	T	G	A	G	S	S	A	F	V	G	N	S	V	V	S	Y	L	N	A	K	E	N
Template Known Secondary structure							T	T			.	.								T											.																		T	.	.	S	T	T								S	T								T	T								S	S
Template Predicted Secondary structure											.	.																			.																			.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.							.	.	390
Predicted Secondary structure													.	.	.																																					.																					.	.	.	.	.	.
Query SS confidence													.	.	.																																					.																					.	.	.	.	.	.
Query Sequence		I	P	C	D	V	E	I	A	S	E	F	.	.	.	R	Y	R	K	S	A	V	R	R	N	S	L	M	I	T	L	S	Q	S	G	E	T	A	D	T	L	A	G	L	R	L	S	K	E	L	G	.	Y	L	G	S	L	A	I	C	N	V	P	G	S	S	L	V	R	E	S	D	.	.	.	.	.	.	L	A	L
Query Conservation													.	.	.																																					.																					.	.	.	.	.	.
Alig confidence													.	.	.																																					.																					.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	I	E	A	I	A	T	T	D	I	V	S	H	P	F	Y	Y	L	K	K	D	E	P	T	L	L	I	S	C	A	R	S	G	N	S	P	E	S	T	A	A	V	T	L	A	E	K	I	V	D	D	I	S	H	L	I	I	T	C	N	S	E	G	K	L	A	L	H	A	K	R	N	Y	N	S	F	L	L	L
Template Known Secondary structure		S											T	T		G	G	G	T			T	T	S									S	S	S																	S	S								S		T	T	S					G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	N	A	G	T	E	I	G	V	A	S	T	K	A	F	T	T	Q	L	T	V	L	L	M	L	V	A	K	L	S	R	L	K	G	L	D	A	S	I	E	H	D	I	V	H	G	L	Q	A	L	P	S	R	I	E	Q	M	L	S	Q	D	K	R	I	E	A	L	A	E	D	F	S	D	K	H	H	A	L	F
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																																					.
Template Conservation																													.	.	.	.	.	.	.	.	.																																					.
Template Sequence		X	P	E	E	S	N	D	K	G	F	A	X	T	G	S	F	S	T	X	L	L	S	C	L	L	I	F	.	.	.	.	.	.	.	.	.	N	L	D	K	L	E	S	I	G	K	Q	I	E	S	I	S	X	Q	G	E	K	V	L	V	N	N	V	E	L	X	K	K	I	V	G	E	.	K	F	K	R	T	V	Y
Template Known Secondary structure				G	G	G	S			S	S	S		S													T	T	.	.	.	.	.	.	.	.	.		T	T	S																						T									T	T	.			S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.			.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.		.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.			.	.	.
Predicted Secondary structure																								.	.																																		.																		.	.
Query SS confidence																								.	.																																		.																		.	.
Query Sequence		L	G	R	G	D	Q	Y	P	I	A	L	E	G	A	L	K	L	K	E	I	S	Y	.	.	I	H	A	E	A	Y	A	A	G	E	L	K	H	G	P	L	A	L	I	D	A	D	M	P	V	I	V	V	A	P	N	N	E	.	L	L	E	K	L	K	S	N	I	E	E	V	R	A	R	G	G	.	.	Q	L	Y
Query Conservation																								.	.																																		.																		.	.
Alig confidence																								.	.																																		.																		.	.
Template Conservation
Template Sequence		L	G	A	A	N	A	F	G	L	A	K	E	S	A	L	K	V	L	E	L	T	A	G	K	I	A	T	L	Y	D	T	P	L	G	F	R	H	G	P	K	S	I	I	D	D	E	T	L	I	V	I	F	F	S	N	D	T	Y	A	R	E	Y	E	Y	D	L	L	K	E	V	Y	S	Q	N	G	N	H	K	V	L
Template Known Secondary structure					T																	T	T	S	S	S											T	T	T	G	G	G	G			T	T									S	S																	S	S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.						.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600				.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.																																		.	.	.
Query SS confidence																								.	.	.	.	.																																		.	.	.
Query Sequence		V	F	A	D	Q	D	A	G	F	V	S	S	D	N	M	H	I	I	E	M	P	H	.	.	.	.	.	V	E	E	V	I	A	P	I	F	Y	T	V	P	L	Q	L	L	A	Y	H	V	A	L	I	K	G	T	D	V	D	Q	P	R	.	.	.	N	L	A	K	S	V
Query Conservation																								.	.	.	.	.																																		.	.	.
Alig confidence																								.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		A	I	S	E	Y	E	D	K	L	I	E	D	N	S	D	Y	F	I	A	I	N	K	E	E	Q	E	Y	E	D	D	S	F	L	S	L	D	Y	L	L	N	A	Q	X	Y	A	F	I	N	S	X	E	L	G	I	G	P	D	N	P	C	P	T	G	E	V	N	R	V	V
Template Known Secondary structure													T	T		S							S	S					S	S	G	G	G	G																				T			T	T		S		T	T		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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