Job Description P17169 Confidence 100.00% Date Thu Jan 5 11:36:02 GMT 2012 Rank 11 Aligned Residues 330 % Identity 24% Template c3fj1A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerase; PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	I	Y	R	H	Y	M	Q	K	E	I	Y	E	Q	P	N	A	I	K	N	T	L	T	G	R	I	S	H	G	Q	V	D	L	S	E	L	G	P	N	A	D	E	L	L	S	K	V	E	H	I	Q	I	L	A	C	G	T	S	Y	N	S	G	M	V	S	R	Y	W	F	E	S	L	A	G	I	P	C	D	V
Query Conservation
Alig confidence																																									.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		X	T	Q	H	I	T	R	X	R	R	E	I	D	E	I	P	E	A	V	Q	R	L	L	D	H	G	A	Q	D	V	A	R	V	A	A	V	L	R	L	.	.	.	.	.	.	R	D	P	S	F	V	A	T	V	A	R	G	S	S	D	H	V	C	T	Y	L	S	Y	A	A	E	L	L	L	G	L	P	V	A	S
Template Known Secondary structure			S																																						.	.	.	.	.	.				S								T
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		326	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		E	I	A	S	E	F	.	R	Y	R	K	S	A	V	R	R	N	S	L	M	I	T	L	S	Q	S	G	E	T	A	D	T	L	A	G	L	R	L	S	K	E	L	G	Y	L	G	S	L	A	I	C	N	V	P	G	S	S	L	V	R	E	S	D	L	A	L	M	T	N	A	G	T	E	I	G	V	A	S	T	K
Query Conservation								.
Alig confidence								.																																						.
Template Conservation																																														.
Template Sequence		L	G	P	S	V	A	S	V	Y	D	A	R	L	R	L	D	R	A	L	C	L	A	V	S	Q	S	G	K	S	P	D	I	V	A	X	T	R	N	A	G	R	D	G	A	.	L	C	V	A	L	T	N	D	A	A	S	P	L	A	G	V	S	A	H	T	I	D	I	H	A	G	P	E	L	S	V	A	A	T	K
Template Known Secondary structure				T					T	T							T	T								S	S	S															T	T		.							S		T	T	S					T	S	S												S	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	T	T	Q	L	T	V	L	L	M	L	V	A	K	L	S	R	L	K	G	L	D	A	S	I	E	H	D	I	V	H	G	L	Q	A	L	P	S	R	I	E	Q	M	L	S	Q	D	K	R	I	E	A	L	A	E	D	F	S	D	K	H	H	A	L	F	L	G	R	G	D	Q	Y	P	I	A	L	E	G	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																				.	.
Template Conservation																				.	.	.	.	.	.	.	.																				.	.
Template Sequence		T	F	V	T	S	A	V	A	G	L	X	L	L	A	D	W	A	E	.	.	.	.	.	.	.	.	D	D	G	L	R	A	A	L	G	N	L	P	E	T	L	A	A	A	S	.	.	R	I	D	W	P	E	X	R	V	A	I	G	A	R	P	S	L	F	T	L	G	R	G	T	S	L	A	V	S	N	E	A	A
Template Known Secondary structure																			T	.	.	.	.	.	.	.	.										T										.	.	T													S									G	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.									.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	K	E	I	S	Y	I	H	A	E	A	Y	A	A	G	E	L	K	H	G	P	L	A	L	I	D	A	D	M	P	V	I	V	V	A	P	N	N	E	L	L	E	K	L	K	S	N	I	E	E	V	R	A	R	G	G	Q	L	Y	V	F	A	D	Q	D	A	G	F	V	S	S	D	N	M	H	I	I	E
Query Conservation
Alig confidence																																																																				.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		L	K	F	K	E	T	C	Q	L	H	A	E	S	Y	S	S	A	E	V	L	H	G	P	V	S	I	V	E	E	G	F	P	V	L	G	F	A	A	G	D	A	A	E	A	P	L	A	E	I	A	D	Q	I	A	A	K	G	A	T	V	F	A	T	T	G	R	.	.	.	.	.	V	T	R	A	R	V	L	E	H
Template Known Secondary structure																	T	T	T	G	G	G	S	S	S						T									S	S	T	T														T	T						S	S	T	T	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	H	V	E	E	V	I	A	P	I	F	Y	T	V	P	L	Q	L	L	A	Y	H	V	A	L	I	K	G	T	D	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	S	G	H	A	L	T	D	P	L	S	L	I	V	S	F	Y	S	X	V	E	A	F	A	S	E	R	G	I	D	P	D
Template Known Secondary structure					S	S	T	T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions