Job Description P17169 Confidence 99.55% Date Thu Jan 5 11:36:02 GMT 2012 Rank 52 Aligned Residues 165 % Identity 13% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	K	E	I	Y	E	Q	P	N	A	I	K	N	T	L	T	G	R	I	S	H	G	Q	V	D	L	S	E	L	G	P	N	A	D	E	L	L	S	K	V	E	H	I	Q	I	L	A	C	G	T	S	Y	N	S	G	M	V	S	R	Y	W	F	E	S	L	A	G	I	P	C	D	V	E	I	A	S	E	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Q	E	R	I	K	A	C	F	T	E	S	I	Q	T	Q	I	A	A	A	E	A	L	P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N
Template Known Secondary structure																								S																	T	T								S	T															T		S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		333	.	.	.	.	.																						.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.				.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query Sequence		Y	R	K	S	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	N	S	L	M	I	T	L	S	Q	S	G	E	T	A	D	T	L	A	G	L	R	L	S	K	E	L	G	Y	L	G	S	L	A	I	C	N	V	P	G	S	S	L	V	R	.	.	.	E	S	D	L
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.																.	.	.
Template Conservation																																																											.
Template Sequence		T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	.	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V
Template Known Secondary structure											T	T	S	T	T	G	G	G	T	T										T	T								S	S	S															T	T		.								T	T										T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	T	N	A	G	T	E	I	G	V	A	S	T	K	A	F	T	T	Q	L	T	V	L	L	M	L	V	A	K	L	S	R	L
Query Conservation
Alig confidence										.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		E	I	R	I	P	S	H	R	.	.	.	.	.	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D	L	I	D	N	T
Template Known Secondary structure						S		S		.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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