Job Description P17169 Confidence 77.25% Date Thu Jan 5 11:36:02 GMT 2012 Rank 88 Aligned Residues 136 % Identity 7% Template c2xznB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:rps0e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.													.
Query SS confidence																																																						.													.
Query Sequence		I	S	H	G	Q	V	D	L	S	E	L	G	P	N	A	D	E	L	L	S	K	V	E	H	I	Q	I	L	A	C	G	T	S	Y	N	S	G	M	V	S	R	Y	W	F	E	S	L	A	G	I	P	C	.	D	V	E	I	A	S	E	F	R	Y	R	K	.	S	A	V	R	R	N	S	L	M	I	T	L	S	Q
Query Conservation																																																						.													.
Alig confidence																															.	.																						.													.
Template Conservation																															.	.
Template Sequence		I	E	E	T	W	Q	K	I	K	L	A	A	R	V	I	A	A	V	Q	H	P	E	D	V	M	V	V	C	S	.	.	R	I	Y	G	Q	R	A	A	I	K	F	A	G	Y	T	H	C	K	S	T	S	S	S	R	W	T	P	G	T	L	T	N	Y	Q	T	L	K	Y	E	E	P	R	V	L	I	V	T	D	P
Template Known Secondary structure																				S	S	G	G	G							.	.	S															T		B					S	S			T	T	T	T	T		T	T		S	S					S					S		T
Template Predicted Secondary structure																															.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	T	A	D	T	L	A	G	L	R	L	S	K	E	L	G	Y	L	G	S	L	A	I	C	N	V	P	G	S	S	L	V	R	E	S	D	L	A	L	M	T	N	A	G	T	E	I	G	V	A	S	T	K	A	F	T	T	Q	L	T	V	L	L	M	L	V	A	K	L	S	R	L	K	G
Query Conservation
Alig confidence						.	.	.	.											.														.	.										.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.											.														.	.										.	.	.	.	.	.	.	.	.
Template Sequence		R	S	D	F	.	.	.	.	Q	A	I	K	E	A	S	Y	V	N	.	I	P	V	I	A	L	C	D	S	D	S	P	L	.	.	A	Y	V	D	V	V	I	P	C	.	.	.	.	.	.	.	.	.	N	N	R	S	T	E	S	I	S	M	I	Y	W	M	I	A	R	E	V	K	I	L	R	G
Template Known Secondary structure		T	T	T		.	.	.	.							T	T	T	T	.									S	S	S			.	.	T	T							S	.	.	.	.	.	.	.	.	.			S	S																				T
Template Predicted Secondary structure						.	.	.	.											.														.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.					.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions