Job Description P17169 Confidence 100.00% Date Thu Jan 5 11:36:02 GMT 2012 Rank 13 Aligned Residues 320 % Identity 27% Template c2decA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:325aa long hypothetical protein; PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 Resolution 1.70 Å

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		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	K	E	I	Y	E	Q	P	N	A	I	K	N	T	L	T	G	R	I	S	H	G	Q	V	D	L	S	E	L	G	P	N	A	D	E	L	L	S	K	V	E	H	I	Q	I	L	A	C	G	T	S	Y	N	S	G	M	V	S	R	Y	W	F	E	S	L	A	G	I	P	C	D	V	E	I	A	S	E	F	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	I	E	I	K	Q	T	P	D	G	I	I	K	A	D	K	.	.	.	.	.	.	.	.	.	.	.	.	V	F	N	K	V	K	D	K	I	S	L	P	N	R	I	L	Y	L	G	C	G	S	S	H	F	L	S	K	L	L	A	M	V	T	N	M	H	G	G	L	G	I	A	L	P	C	S	E	F	L	Y
Template Known Secondary structure							T	T											.	.	.	.	.	.	.	.	.	.	.	.						T	T	T					S							S	T																T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.													20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		333	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		Y	R	K	.	S	A	V	R	R	N	S	L	M	I	T	L	S	Q	S	G	E	T	A	D	T	L	A	G	L	R	L	S	K	E	L	G	Y	L	G	S	L	A	I	C	N	V	P	G	S	S	L	V	R	E	S	D	L	A	L	M	T	N	A	G	T	E	I	G	V	A	S	T	K	A	F	T	T	Q	L	T
Query Conservation					.
Alig confidence					.																													.	.	.			.								.																					.
Template Conservation																																		.	.	.			.								.																					.
Template Sequence		S	K	E	T	Y	P	I	G	E	V	E	L	A	V	G	I	S	R	S	G	E	T	T	E	I	L	L	A	L	E	K	I	.	.	.	N	V	.	K	K	L	G	I	T	T	.	R	E	S	S	L	T	R	M	C	D	Y	S	L	V	V	P	A	I	E	E	.	S	V	V	M	T	H	S	F	T	S	F	Y	F
Template Known Secondary structure			G	G	G	S				S		S							S	S	S											T		.	.	.		S	.							S	.	S	S	S						S	S											.	S	S	S
Template Predicted Secondary structure																																		.	.	.			.								.																					.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.		.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	M	L	V	A	K	L	S	R	L	K	G	L	D	A	S	I	E	H	D	I	V	H	G	L	Q	A	L	P	S	R	I	E	Q	M	L	S	Q	D	K	R	I	E	A	L	A	E	D	F	S	D	K	H	H	A	L	F	L	G	R	G	D	Q	Y	P	I	A	L	E	G	A	L	K	L	K	E	I	S
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		A	Y	L	Q	L	L	R	Y	S	Y	G	L	P	P	L	N	.	.	.	.	.	.	.	.	.	.	A	G	E	I	S	K	A	T	E	K	S	L	E	Y	E	R	Y	I	R	E	I	V	E	S	F	D	F	.	Q	N	I	I	F	L	G	S	G	L	L	Y	P	V	A	L	E	A	S	L	K	M	K	E	M	S
Template Known Secondary structure											T	T						.	.	.	.	.	.	.	.	.	.													T	T														.	S								T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	H	A	E	A	Y	A	A	G	E	L	K	H	G	P	L	A	L	I	D	A	D	M	P	V	I	V	V	A	P	N	N	E	L	L	E	K	L	K	S	N	I	E	E	V	R	A	R	G	G	Q	L	Y	V	F	A	D	Q	D	A	G	F	V	S	S	D	N	M	H	I	I	E	M	P	H	V	E	E	V
Query Conservation
Alig confidence																																				.	.																										.	.	.
Template Conservation																																				.	.																										.	.	.
Template Sequence		I	F	W	S	E	A	Y	P	T	F	E	V	R	H	G	F	K	A	I	A	D	E	K	T	L	V	V	L	M	V	E	E	P	F	.	.	E	W	H	E	K	L	V	K	E	F	K	N	Q	G	A	K	V	L	V	I	S	N	S	P	Q	.	.	.	D	L	G	Q	D	Y	S	I	E	L	P	R	L	S	K	D
Template Known Secondary structure										G	G	G	G	G	T	T	G	G	G	G		S	T	T								S	S			.	.													T	T								S				.	.	.			S		S										T	T
Template Predicted Secondary structure																																				.	.																										.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	P	I	F	Y	T	V	P	L	Q	L	L	A	Y	H	V	A	L	I	K	G	T	D	V	D	Q	P	R	N	L	A	K	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	P	I	P	Y	L	P	I	V	Q	L	L	S	Y	Y	K	A	V	S	R	G	L	N	P	D	N	P	R	F	L	D	K	V	V
Template Known Secondary structure		T	T	T	T	T																T	T			T	T	S		T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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