Job Description P17169 Confidence 100.00% Date Thu Jan 5 11:36:02 GMT 2012 Rank 15 Aligned Residues 328 % Identity 18% Template c2a3nA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase; PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution Resolution 1.23 Å

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	M	Q	K	E	I	Y	E	Q	P	N	A	I	K	N	T	L	T	G	R	I	S	H	G	Q	V	D	L	S	E	L	G	P	N	A	D	E	L	L	S	K	V	E	H	I	Q	I	L	A	C	G	T	S	Y	N	S	G	M	V	S	R	Y	W	F	E	S	L	A	G	I	P	C	D	V	E	I	A	S	E
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.											.	.
Template Conservation																						.	.	.	.	.	.	.	.											.	.
Template Sequence		G	F	N	Q	D	E	Y	L	T	S	A	R	E	I	I	A	A	R	Q	K	.	.	.	.	.	.	.	.	A	E	Q	V	A	D	E	I	Y	Q	.	.	A	G	F	S	S	L	F	F	A	S	V	G	G	S	L	A	P	X	X	A	I	N	E	F	A	K	E	L	T	T	L	P	V	Y	V	E	Q	A	A	E
Template Known Secondary structure		T															T	T				.	.	.	.	.	.	.	.											.	.				S								G	G	G																	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.											.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		331	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		F	R	Y	R	K	.	S	A	V	R	R	N	S	L	M	I	T	L	S	Q	S	G	E	T	A	D	T	L	A	G	L	R	L	S	K	E	L	G	Y	L	G	S	L	A	I	C	N	V	P	G	S	S	L	V	R	E	S	D	L	A	L	M	T	N	A	G	T	E	I	G	V	A	S	T	K	A	F	T	T	Q
Query Conservation							.
Alig confidence							.																																	.
Template Conservation																																								.
Template Sequence		L	I	H	K	G	N	K	R	L	N	K	D	S	V	V	I	T	L	S	K	S	G	D	T	K	E	S	V	A	I	A	E	W	C	K	A	Q	G	.	I	R	V	V	A	I	T	K	N	A	D	S	P	L	A	Q	A	A	T	W	H	I	P	X	R	H	K	N	G	V	E	Y	E	Y	X	L	L	Y	W	L	F
Template Known Secondary structure								T	T			T	T								S	S	S															T	T	.								S		T	T	S					T		S								S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.
Predicted Secondary structure																																												.																														.
Query SS confidence																																												.																														.
Query Sequence		L	T	V	L	L	M	L	V	A	K	L	S	R	L	K	G	L	D	A	S	I	E	H	D	I	V	H	G	L	Q	A	L	P	S	R	I	E	Q	M	L	S	Q	.	D	K	R	I	E	A	L	A	E	D	F	S	D	K	H	H	A	L	F	L	G	R	G	D	Q	Y	P	I	A	.	L	E	G	A	L	K	L
Query Conservation																																												.																														.
Alig confidence										.	.	.	.	.	.	.	.	.																										.																														.
Template Conservation										.	.	.	.	.	.	.	.	.
Template Sequence		F	R	V	L	S	R	N	N	.	.	.	.	.	.	.	.	.	E	F	A	S	Y	D	R	F	A	S	Q	L	E	I	L	P	A	N	L	L	K	A	K	Q	K	F	D	P	Q	A	D	A	I	A	S	R	Y	H	N	S	D	Y	X	X	W	V	G	G	A	E	X	W	G	E	V	Y	L	F	S	X	C	I	L
Template Known Secondary structure								T	T	.	.	.	.	.	.	.	.	.	S		T	T								G	G	G																								T	T		S								G	G	G											T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	I	S	Y	I	H	A	E	A	Y	A	A	G	E	L	K	H	G	P	L	A	L	I	D	A	D	M	P	V	I	V	V	A	P	N	N	E	L	L	E	K	L	K	S	N	I	E	E	V	R	A	R	G	G	Q	L	Y	V	F	A	D	Q	D	A	G	F	V	S	S	D	N	M	H	I	I	E	M	P	H
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.
Template Sequence		E	E	X	Q	W	K	R	T	R	P	V	S	S	A	E	F	F	H	G	A	L	E	L	L	E	K	D	V	P	L	I	L	V	K	G	E	G	K	C	R	A	L	D	E	R	V	E	R	F	A	S	K	I	T	D	N	L	V	V	I	D	P	K	A	Y	A	L	D	G	I	D	.	.	.	.	.	.	.	D	E
Template Known Secondary structure																		T	T	T	G	G	G	G			T	T									S	S	T	T																S							G	G	G	S			T	T	S		.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300								.	.
		568	.	570	.	.	.	.		.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		V	E	E	V	I	A	P	.	I	F	Y	T	V	P	L	Q	L	L	A	Y	H	V	A	L	I	K	G	T	D	V	D	Q	P	R	N	L	A	K	S
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		F	R	W	I	X	A	P	C	V	V	S	T	L	L	V	D	R	L	A	A	H	F	E	K	Y	T	G	H	S	L	D	I	R	R	Y	Y	R	Q	F
Template Known Secondary structure		G														T	T														T	T			S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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