Job Description P17169 Confidence 99.92% Date Thu Jan 5 11:36:02 GMT 2012 Rank 32 Aligned Residues 197 % Identity 13% Template c1q15A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:cara; PDBTitle: carbapenam synthetase Resolution 2.30 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	G	Y	D	S	A	G	L	A	V	V	D	A	E	G	H	M	T	R	L	R	R	L	G	K	V	Q	M	L	A	Q	A	A	E	E	H	P	L	H	G	G	T	G	I	A	H	T	R	W	A	T	H	G	E	P	S	E	V	N	A	H	P	H	V	S	E	H	I	V	V	V	H	N	G	I	I	E	N	H
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		Q	R	D	F	D	G	K	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	S	N	G	Y	L	F	I	E	Q	.	.	.	N	G	H	Y	Q	K	C	E	M	E	R	G	T	A	Y	L	I	G	S	L	Y	N	R
Template Known Secondary structure			T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T							T	.	.	.	T									S	S	S									S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.																																			.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		E	P	L	R	E	E	L	K	A	R	G	Y	T	F	V	S	E	T	D	T	E	V	I	A	H	L	V	N	W	E	L	K	Q	G	G	T	L	R	E	A	V	L	R	A	I	P	Q	L	R	G	A	Y	G	T	V	I	M	D	S	R	H	P	D	T	L	L	A	A	R	S	G	.	.	.	S	P	L	V	I	G
Query Conservation																																																																									.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.																		.	.										.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		T	F	L	I	G	L	A	G	V	W	E	G	E	A	Y	L	A	N	D	A	E	L	L	A	L	L	F	T	R	L	G	A	N	.	.	.	.	.	.	.	.	.	.	A	L	A	L	A	E	G	D	F	C	F	F	I	D	E	P	N	.	.	G	E	L	T	V	I	T	E	S	R	G	F	S	P	V	H	V	V
Template Known Secondary structure									T	T	T		G	G	G	G	G																G	G	.	.	.	.	.	.	.	.	.	.	G	G	G	G			S	S								T	T	.	.	S								S	S	S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	M	G	E	N	F	I	A	S	D	Q	L	A	L	L	P	V	T	R	R	F	I	F	L	E	E	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	E	I	T	R	R	S	V	N	I	F	D	K	T	G	A	E	V	K	R	Q	D	I	E	S	N	L	Q	Y	D	A	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		Q	.	G	K	K	A	W	M	T	N	S	L	K	L	V	T	A	A	E	G	E	G	A	L	W	F	E	E	E	A	L	V	C	Q	S	L	M	R	A	D	T	Y	T	P	V	K	N	A	Q	R	L	K	P	G	A	V	H	V	L	T	H	D	S	E	G	Y	S	F	V	E	S	R	T	L	T	T	P	A	S	N
Template Known Secondary structure			.	S	S	S					S											T	T	S	S		B							T	T		S				T	T			S	B	T	T						S	S									T	T										S
Template Predicted Secondary structure			.
Template SS confidence
		131		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	I	Y	R	H	Y	M	Q	K	E	I	Y	E	Q	P	N	A	I	K	N	T	L	T	G	R	I	S	H
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		Q	L	L	A	L	P	R	E	P	L	L	A	L	I	D	R	.	.	Y	L	N	A	P	L	E	D	L	A	P	R
Template Known Secondary structure		S		B														.	.										G	G	G
Template Predicted Secondary structure																		.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions