Job Description P17169 Confidence 38.67% Date Thu Jan 5 11:36:02 GMT 2012 Rank 186 Aligned Residues 163 % Identity 15% Template c1o57A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis Resolution 2.20 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		S	D	Q	L	A	L	L	P	V	T	R	R	F	I	F	L	E	E	G	D	I	A	E	I	T	R	R	S	V	N	I	F	D	K	T	G	A	E	V	K	R	Q	D	I	E	S	N	L	.	.	.	.	Q	Y	D	A	G	D	K	G	I	Y	R	H	Y	M	Q	K	E	I	Y	E	Q	P	N	A	I	K	N	T
Query Conservation																																																		.	.	.	.
Alig confidence																																																		.	.	.	.													.	.
Template Conservation																																																																		.	.
Template Sequence		S	E	D	L	T	I	I	K	Q	T	F	E	Q	Q	G	I	G	T	L	L	T	V	P	G	A	A	G	G	V	K	Y	I	P	K	M	K	Q	A	E	A	E	E	F	V	Q	T	L	G	Q	S	L	A	N	P	E	R	I	L	P	G	G	Y	V	Y	.	.	L	T	D	I	L	G	K	P	S	V	L	S	K	V
Template Known Secondary structure															T	T	S								S	T	T																										T		G	G	G			T	T	T				.	.		T	T	T	T	T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																		.	.	330
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	G	R	I	S	H	G	Q	V	D	L	S	E	L	G	P	N	A	D	E	L	L	S	K	V	E	H	I	Q	I	L	A	C	G	T	S	Y	N	S	G	M	V	S	R	Y	W	F	E	S	L	A	G	I	P	C	D	V	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	E
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	A	S	V	F	A	E	R	E	I	D	V	V	M	T	V	A	T	K	.	.	.	G	I	P	L	A	Y	A	A	A	S	Y	L	N	V	P	V	V	I	V	R	K	D	G	S	T	V	S	I	N	Y	V	S	G	S	S	N	R	I	Q	T
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T	S			S						T	T	T	.	.	.	T												T							B													S	S			S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		119	120																.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		F	R	Y	R	K	S	A	V	R	R	N	S	L	M	I	T	L	S	Q	S	G	E	T	A	D	T	L	A	G	L	R	L	S	.	K	E	L	G	Y	L	G	S	L	A	I	C
Query Conservation																																			.
Alig confidence																																			.						.
Template Conservation																																									.
Template Sequence		M	S	L	A	K	R	S	M	K	T	G	S	N	V	L	I	I	D	D	F	M	K	A	G	G	T	I	N	G	M	I	N	L	L	D	E	F	N	A	.	N	V	A	G	I	G
Template Known Secondary structure						G	G	G	S		T	T											S	S	S										T	G	G	G	T		.
Template Predicted Secondary structure																																									.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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