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Job DescriptionP17169
Confidence100.00%DateThu Jan 5 11:36:02 GMT 2012
Rank21Aligned Residues369
% Identity21%Templatec1ecjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glutamine phosphoribosylpyrophosphate PDBTitle: escherichia coli glutamine phosphoribosylpyrophosphate2 (prpp) amidotransferase complexed with 2 amp per tetramer
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  CGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEP
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Template Sequence  CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSS
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   82.......90. ........100.........110.. .......120.........130.........140. ........150
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Query Sequence  SEVNAHPHVS. . . EHIVVVHNGIIENHEPLREEL. KARGYTFVSETDTEVIAHLVNWELKQGGT. . . . . . . LREAVLRAI
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Template Sequence  SASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATN
Template Known Secondary structure  SSS

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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   151........160.........170...... ...180..... ....190.........200 .........210.........220.
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Query Sequence  PQLRGAYGTVIMDSRHPDTLLAARSG. . . SPLVIGLGM. . . . . GENFIASDQLALLPV. TRRFIFLEEGDIAEITRRSVN
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Template Sequence  RLIRGAYACVAMIIG. . HGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQL
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TT..T
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   161........170..... ....180.........190.........200.........210.........220.........230........
 
   222.......230........ .240.........250.........260.........270.........280.........290........
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Query Sequence  IFDKTGAEVKRQDIESN. . . LQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQI
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Template Sequence  FTRQCADNPVSNPCLFEYVYFARPDSFIDK. . . . . . . . . . . . . . . . ISVYSARVNMGTKLGEKIAREW. . . . EDLDIDVV
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   239240.........250.........260........ .270.........280.........290 ........
 
   299300.........310.........320.. .......330.........340... ......350.......
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Query Sequence  LACGTSYNSGMVSRYWFESLAGIP. CDVEIASEFRYRKSAVRRNSL. . . . . . . . . . . . . . . . . . . . MITLSQSGETADTL
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Template Sequence  IPIPET. . . SCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTS
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TTT...T

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   299300.... .....310.........320.........330.........340.........350.........360.........370.....
 
   358.360... ......370.........380.........390.......
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Query Sequence  AGLRLS. KELGYLGSLAICNVPGSSLVRESDLALMTNAGTE
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Template Sequence  EQIIEMAREAGAKKVYLASAAP. . EIRFPNVYGIDMPSATE
Template Known Secondary structure  TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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