Return to main results Retrieve Phyre Job Id

Job DescriptionP0CB62
Confidence2.43%DateThu Jan 5 11:30:10 GMT 2012
Rank44Aligned Residues10
% Identity30%Templatec1d4uA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:nucleotide excision repair protein xpa (xpa-mbd); PDBTitle: interactions of human nucleotide excision repair protein2 xpa with rpa70 and dna: chemical shift mapping and 15n nmr3 relaxation studies
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40..
Predicted Secondary structure 
Query SS confidence 









Query Sequence  VALLIWKVWG
Query Conservation 


  
 


Alig confidence 









Template Conservation 


 
   

Template Sequence  IVKRSLEVWG
Template Known Secondary structure  TS
Template Predicted Secondary structure 
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   8990........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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