Job Description P32138 Confidence 96.28% Date Thu Jan 5 11:49:24 GMT 2012 Rank 122 Aligned Residues 146 % Identity 14% Template d2d3na2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.										.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																									.																			.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																									.																			.	.	.	.	.	.	.	.	.									.	.
Query Sequence		E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	K	V	N	G	I	W	A	Q	.	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	.	.	.	.	.	.	.	.	.	K	W	N	S	E	N	Y	P	.	.	Q	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y
Query Conservation																									.																			.	.	.	.	.	.	.	.	.									.	.
Alig confidence																		.	.						.																			.	.	.	.	.	.	.	.	.									.	.
Template Conservation																		.	.
Template Sequence		N	R	L	N	S	D	A	S	N	L	K	S	K	G	I	T	.	.	A	V	W	I	P	P	A	W	K	G	A	S	Q	N	D	V	G	Y	G	A	Y	D	L	Y	D	L	G	E	F	N	Q	K	G	T	V	R	T	K	Y	G	T	R	S	Q	L	Q	A	A	V	T	S	L	K	N	N	G	I	Q	V	Y	G	D
Template Known Secondary structure															T			.	.								S			S	S	T	T			S		S				T	T		S	S		S		B	T	T	B	S	S	B	T	T	B															T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		334																																																								.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	Y	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	A
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	M	N	H	K	G	G	A	D	A	T	E	M	V	R	A	V	E	V	N	P	N	N	R	N	Q	E	V	T	G	E	Y	T	I	E	A	W	T	R	F	D	F	P	G	R	G	N	T	H	S	S	F	K	W	R	W	Y	H	F	D	G	V	D	W	D	Q	S	R	R	L	N	N	R	I	Y	K	F	R	G
Template Known Secondary structure					S				S		S												T	T							S											B			T	T	T	T	T	S	S					B		G	G	G					S			T	T	T			S	S							S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.								.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	.	.	.	.	.	.	.	V	D	L	T	N	P	E	A	Y	A	W	F	K	E	V	I	K	K	N	M	I	E	L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P	T	D
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	K	A	W	D	W	E	V	D	T	E	N	G	N	Y	D	Y	L	M	Y	A	D	I	D	M	D	H	P	E	V	V	N	E	L	R	N	W	G	V	W	Y	T	N	T	L	G	L	D	G	F	R	I	D	A	V	K	H	I	K	Y	S
Template Known Secondary structure		T	T					S	S				T	T	S						S	S					T	T																				T		S					T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions