Return to main results Retrieve Phyre Job Id

Job DescriptionP32138
Confidence31.85%DateThu Jan 5 11:49:24 GMT 2012
Rank192Aligned Residues82
% Identity9%Templated1x1na1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   316...320.........330.........340.........350.........360.... .....370.........380...
Predicted Secondary structure 



















............









Query SS confidence 
















































. . . . . . . . . . . .


















Query Sequence  LDSRIKQWNQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASGGDYL. . . . . . . . . . . . VEFGEFYGGVVDLTNPEAY
Query Conservation      
  
   
 
    
 
 
        
    
  

   
    ............           




 
 
Alig confidence 



























..


















............


















Template Conservation        

   

 
 






  


..



 
 

 
         





 

  

 

 
 
 
  
   

Template Sequence  WKKVRDYARSKGISIMGDMPIYVGYHSA. . DVWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLWGSPLYDWKAMEKDGF
Template Known Secondary structure  TT
SS

SSS..T
GGGB
B
TTS
BSB

SSSSS

B



B
B
TTS
Template Predicted Secondary structure 





..































Template SS confidence 















































































   224.....230.........240.........250. ........260.........270.........280.........290.........300.
 
   384.....390.........
Predicted Secondary structure 


Query SS confidence 















Query Sequence  AWFKEVIKKNMIELGC
Query Conservation   

           

Alig confidence 















Template Conservation   

  


      
 
Template Sequence  SWWVRRIQRATDLFDE
Template Known Secondary structure 
S
Template Predicted Secondary structure 

Template SS confidence 















   302.......310.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions