Return to main results Retrieve Phyre Job Id

Job DescriptionP32138
Confidence96.81%DateThu Jan 5 11:49:24 GMT 2012
Rank115Aligned Residues146
% Identity16%Templated1ud2a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.13

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300...... ...310.... .....320.........
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Query Sequence  GGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNW. . . . . . . . . . KWNSENYP. . . QLDSRIKQWNQEGVQ
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Template Sequence  QHWNRLHDDAAALSDAGIT. . AIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRT. KYGTKAQLERAIGSLKSNDIN
Template Known Secondary structure 
T

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SSSTT

SSSTT
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S
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TT
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   20.........30........ .40.........50.........60.........70..... ....80.........90......
 
   330...... ...340.........350.........360......
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Query Sequence  FLAYINP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YVASDKDLCEEAAQHGYLAKDASGGDYLVE
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Template Sequence  VYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFR
Template Known Secondary structure 

S


STT
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B

GGGTTSS



B
GGGTTTT
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   367..370. ........380.........390.........400.........410.
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Query Sequence  FGEFY. . . . . . . . . . . . . . . . GGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMADFGEYLP
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Template Sequence  FANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIP
Template Known Secondary structure  TT



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TTS




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   177..180.........190.........200.........210.........220.........230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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