Return to main results Retrieve Phyre Job Id

Job DescriptionP32138
Confidence97.71%DateThu Jan 5 11:49:24 GMT 2012
Rank78Aligned Residues161
% Identity10%Templated1ua7a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.21

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWN. . . . . . . . . SENYP. . . QLD
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Template Sequence  PSIKSGTILHAWNWSFNTLKHNMKDIHDAGYT. . AIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFK
Template Known Secondary structure 

TTTS

TTB
TTT
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TGGG

BGGGGGGGG
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Query Sequence  SRIKQWNQEGVQFLA. YINPYVASDKDLCEEAAQHGYLAKDASGG. . . . . . . DYLVEFGEFYGGVVDLTNPEAYAWFKEV
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Template Sequence  EMCAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRF
Template Known Secondary structure  TTT


SB

S
TTTS
TSTT


B


TT
SBBTTB

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   390.........400.........410...
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Query Sequence  IKKNMIELGCGGWMADFGEYLPTD
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Template Sequence  LERAL. NDGADGFRFDAAKHIELP
Template Known Secondary structure  .TT

TTGGGS

T
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   162.... ...170.........180....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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