Job Description P32138 Confidence 98.05% Date Thu Jan 5 11:49:24 GMT 2012 Rank 50 Aligned Residues 147 % Identity 10% Template d1h3ga3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.1

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.																							.	.																							.
Query SS confidence																																.	.	.																							.	.																							.
Query Sequence		G	G	T	E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	K	V	N	G	I	W	A	Q	D	W	S	G	.	.	.	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	E	N	Y	P	.	.	Q	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	.
Query Conservation																																.	.	.																							.	.																							.
Alig confidence																					.	.										.	.	.																							.	.																							.
Template Conservation																					.	.
Template Sequence		G	D	I	R	G	T	I	D	H	L	D	Y	I	A	G	L	G	F	T	.	.	Q	L	W	P	T	P	L	V	E	N	D	A	A	A	Y	S	Y	H	G	Y	A	A	T	D	H	Y	R	I	D	P	R	Y	G	S	N	E	D	F	V	R	L	S	T	E	A	R	K	R	G	X	G	L	I	Q	D	V	V	L	S
Template Known Secondary structure										T								T			.	.													S	S		G	G	G			S		S							T	T	T																T	T										S
Template Predicted Secondary structure																					.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.																					.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	T	N	P	E	A	Y	A	W	F	K	E	V	I	K	K	N	M	I	E
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	G	K	H	H	W	W	X	K	D	L	P	T	P	D	W	I	N	Y	G	G	K	F	V	P	T	Q	H	H	R	V	A	V	Q	D	P	Y	A	A	Q	A	D	S	E	N	F	T	K	G	W	F	V	E	G	X	P	D	L	N	Q	T	N	P	L	V	A	N	Y	L	I	Q	N	N	I	W	W	I	E	Y
Template Known Secondary structure		B			T	T	S	G	G	G	G	S		S	S	T	T	S	B	S			S	S			B					G	G	G	G	S		T	T												S	B	S	S	T	T	S		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	L	S	G	L	R	I	D	T	Y	G	Y	S	D
Template Known Secondary structure			T		S					T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions