Job Description P32138 Confidence 98.43% Date Thu Jan 5 11:49:24 GMT 2012 Rank 33 Aligned Residues 147 % Identity 12% Template d1gvia3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.3

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340
Predicted Secondary structure																												.																																																	.
Query SS confidence																												.																																																	.
Query Sequence		G	G	T	E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	K	V	N	G	I	W	A	Q	.	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	E	N	Y	P	Q	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	.	Y	V	A	S
Query Conservation																												.																																																	.
Alig confidence																				.	.							.																																																	.
Template Conservation																				.	.
Template Sequence		G	D	L	Q	G	I	I	D	H	L	D	Y	L	A	D	L	G	I	.	.	T	G	I	Y	L	T	P	I	F	R	A	P	S	N	H	K	Y	D	T	A	D	Y	F	E	I	D	P	H	F	G	D	K	E	T	L	K	T	L	V	K	R	C	H	E	K	G	I	R	V	M	L	D	A	V	F	N	H	C	G	Y
Template Known Secondary structure										T								T		.	.									B	S		S	S	S	S	T	T	S		S		T	T	S	B		T	T	T																	T										S	B			T
Template Predicted Secondary structure																				.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		341	.	.	.	.	.	.	.	.	350	.														.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	D	L	C	E	E	A	A	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	V	D	L	T	N	P	E	A	Y	A	W	F	K	E	V	I	K	K	N	M	I	E	L	G	C	G	G	W	M	A	D	F	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	A	P	F	Q	D	V	L	K	N	G	A	A	S	R	Y	K	D	W	F	H	I	R	E	F	P	L	Q	T	E	P	R	P	N	Y	D	T	F	A	F	V	P	H	M	P	K	L	N	T	A	H	P	E	V	K	R	Y	L	L	D	V	A	T	Y	W	I	R	E	F	D	I	D	G	W	R	L	D	V	A
Template Known Secondary structure		T											G	G	G		T	T	G	G	G	B		B	S	S	S	S				S	S	S		S	B		B	S	S	S		T	T	S	B	B	B		T	T	S																		S								T	T	G
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		408	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	I	D
Template Known Secondary structure		G	G	S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions