Return to main results Retrieve Phyre Job Id

Job DescriptionP32138
Confidence82.04%DateThu Jan 5 11:49:24 GMT 2012
Rank143Aligned Residues60
% Identity18%Templatec3pohA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endo-beta-n-acetylglucosaminidase f1; PDBTitle: crystal structure of an endo-beta-n-acetylglucosaminidase (bt_3987)2 from bacteroides thetaiotaomicron vpi-5482 at 1.55 a resolution
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   315....320.........330.........340.........350.........360.........370.........380.........390....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  QLDSRIKQWNQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNM
Query Conservation 
    
  
   
 
    
 
 
        
    
  

   
               




 
  

        
Alig confidence 





















...............................









.















Template Conservation       
  

  
 

 


 
...............................     
    .
      

  
  

Template Sequence  NNETLLQPLRRRGVKVLLGLLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NHDITGLAQL. SEQGAKDFAREVAQYC
Template Known Secondary structure  TTTT

...............................
SSS

TT
B.
Template Predicted Secondary structure 




...............................







.
Template SS confidence 















































































   254.....260.........270..... ....280..... ....290.........300.
 
   395....400......
Predicted Secondary structure 




Query SS confidence 











Query Sequence  IELGCGGWMADF
Query Conservation     



   
 
Alig confidence 











Template Conservation    









Template Sequence  KAYNLDGVNYDD
Template Known Secondary structure  TT


Template Predicted Secondary structure 



Template SS confidence 











   302.......310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions