Job Description P32138 Confidence 99.81% Date Thu Jan 5 11:49:24 GMT 2012 Rank 16 Aligned Residues 521 % Identity 10% Template c3mi6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of the alpha-galactosidase from lactobacillus2 brevis, northeast structural genomics consortium target lbr11. Resolution 2.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		N	N	D	S	F	T	L	H	F	Q	Q	R	L	I	L	T	H	S	K	D	N	P	C	L	W	I	G	S	G	I	A	D	I	D	M	F	R	G	N	F	.	.	S	I	K	D	K	L	Q	E	K	I	A	L	T	D	A	I	V	S	Q	S	P	D	G	W	L	I	H	F	S	R	G	S	D	I	S	A	T	L
Query Conservation																																										.	.
Alig confidence																									.																	.	.
Template Conservation																									.
Template Sequence		R	Q	P	A	F	Q	V	T	Q	A	N	G	S	R	I	T	E	L	T	Y	D	H	Y	.	Q	L	L	T	G	K	Q	R	L	A	N	L	P	S	T	F	D	D	T	D	D	D	A	Q	T	L	V	V	S	F	N	D	R	I	T	G	L	A	L	D	L	N	Y	S	I	F	P	H	Q	D	V	I	V	K	S	A
Template Known Secondary structure		S			S						T	T	S												.					S					S	S	S							S														T	T	T												G	G	G	T
Template Predicted Secondary structure																									.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		N	I	S	A	D	D	Q	G	R	L	L	L	E	L	Q	N	D	N	L	N	H	N	R	I	W	L	R	L	A	A	Q	P	E	D	H	.	.	.	.	I	Y	G	C	G	E	Q	F	S	Y	F	D	L	R	G	K	P	F	P	L	W	T	S	E	Q	G	V	G	R	N	K	Q	T	Y	V	T	W	Q	A	D	C
Query Conservation																																					.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		K	F	T	N	P	S	S	E	K	L	V	L	N	R	A	.	.	.	.	.	.	.	.	L	S	S	Q	L	D	L	P	D	A	N	Y	D	L	I	Q	F	S	G	T	W	A	R	E	R	H	L	Y	R	H	P	L	R	P	G	X	Q	S	I	S	S	L	R	X	A	S	S	H	Q	Q	N	P	F	X	X	L	A
Template Known Secondary structure							S	S	S								.	.	.	.	.	.	.	.								S													T	T												S									S	S	S	S		S	S	B		S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																									.															.	.	.	.	.																				.	.
Query SS confidence																																									.															.	.	.	.	.																				.	.
Query Sequence		K	E	N	A	G	G	D	Y	Y	W	T	F	F	P	Q	P	T	F	V	S	T	Q	K	Y	Y	C	H	V	D	N	S	C	Y	M	N	F	D	F	S	.	A	P	E	Y	H	E	L	A	L	W	E	D	K	A	.	.	.	.	.	T	L	R	F	E	C	A	D	T	Y	I	S	L	L	E	K	L	T	A	.	.
Query Conservation																																									.															.	.	.	.	.																				.	.
Alig confidence																																									.															.	.	.	.	.																				.	.
Template Conservation
Template Sequence		R	P	Q	T	T	D	E	Q	G	A	V	F	G	F	N	L	V	Y	S	G	N	F	L	D	A	I	E	V	D	Q	Y	S	T	S	R	I	L	T	G	I	N	P	D	E	F	G	W	N	L	A	P	Q	A	T	F	Q	T	P	E	A	I	L	S	Y	T	S	A	G	X	N	Q	L	S	Q	Q	X	A	S	F	Y
Template Known Secondary structure			T	T			S	S	S	B								S			S	S									T	T	S										S	T	T							T	T														S	B
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
						242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																							.	.
Query SS confidence		.	.	.	.																							.	.
Query Sequence		.	.	.	.	L	L	G	R	Q	P	E	L	P	D	W	I	Y	D	G	V	T	L	G	I	Q	G	.	.	G	T	E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	K	V	N	G	I	W	A	Q	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	E	N	Y	P	Q
Query Conservation		.	.	.	.																							.	.
Alig confidence		.	.	.	.																							.	.																		.	.																.
Template Conservation																																															.	.																.
Template Sequence		Q	Q	H	L	V	N	P	R	F	A	H	E	E	R	P	V	L	I	N	N	W	E	A	T	Y	F	D	F	N	E	A	K	L	X	T	I	V	N	Q	A	K	R	L	G	I	.	.	E	X	F	V	L	D	D	G	W	F	G	H	R	D	D	.	D	T	T	S	L	G	D	W	F	V	D	Q	R	K	F	P	D
Template Known Secondary structure					T	S		T	T	T	T	T	S													T	T																		T		.	.							T	T		B	T	T		S	S	.	T	T	S		T	T			S	B		T	T	T		T	T
Template Predicted Secondary structure																																															.	.																.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
			316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure		.																							.
Query SS confidence		.																							.
Query Sequence		.	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	Y	.	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	V	D	L	T	N	P	E	A	Y	A	W	F	K	E	V	I	K	K	N
Query Conservation		.																							.
Alig confidence		.																							.										.	.																	.	.	.	.
Template Conservation																																			.	.																	.	.	.	.
Template Sequence		G	I	E	H	F	S	Q	A	V	H	Q	Q	G	X	K	F	G	L	W	F	E	P	E	X	V	S	V	D	S	D	L	Y	Q	.	.	Q	H	P	D	W	L	I	H	A	P	K	S	T	P	T	P	.	.	.	.	G	R	H	Q	F	V	L	D	X	A	R	P	E	V	V	D	Y	L	F	K	L	X	S	Q	X
Template Known Secondary structure													T	T									T	T				S	S	S	S				.	.			G	G	G	B				T	T						.	.	.	.	S	S	S				B		T	T
Template Predicted Secondary structure																																			.	.																	.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.					.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.								.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.
Query Sequence		M	I	E	L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P	T	D	T	Y	L	H	N	G	V	S	A	E	I	M	H	N	A	W	P	A	L	W	A	K	C	N	Y	E	A	L	E	E	T	G	K	L	G	E	I	L	F	F	M	R	A	G	S	T	G	S	Q	K	.	.	.	.	.	.	.	Y	S	T
Query Conservation																																																																								.	.	.	.	.	.	.
Alig confidence																			.	.	.																																	.																		.	.	.	.	.	.	.
Template Conservation																			.	.	.																																	.
Template Sequence		I	E	S	A	N	L	D	Y	I	K	W	D	X	N	R	Y	A	.	.	.	T	E	X	F	S	S	R	L	T	S	D	Q	Q	L	E	L	P	H	R	Y	I	L	G	V	Y	Q	L	Y	A	R	L	T	.	Q	A	Y	P	N	V	L	F	E	S	C	A	S	G	G	G	R	F	D	L	G	X	X	Y	Y	A	P
Template Known Secondary structure						T		S								S			.	.	.		S				S	S	S		G	G	G	G	G	G																		.				T	T							S	T	T	T	S	S		S							S	S
Template Predicted Secondary structure																			.	.	.																																	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.				.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	W	A	G	D	Q	N	V	D	W	S	L	D	D	G	L	A	S	V	V	P	A	A	L	S	L	A	M	T	G	H	G	L	H	H	S	D	I	G	G	Y	T	T	L	F	E	M	K	R	S	K	E	L	L	L	R	W	C	D	F	S	A	F	T	P	M	M	R	T	H	E	G	N	R	P	G	D	N	W
Query Conservation
Alig confidence										.	.	.	.	.	.																													.	.	.																											.	.	.	.	.
Template Conservation										.	.	.	.	.	.																													.	.	.																											.	.	.	.	.
Template Sequence		Q	A	W	T	S	D	D	T	.	.	.	.	.	.	D	A	A	E	R	L	L	I	Q	F	G	T	S	Y	G	Y	P	Q	A	X	X	G	A	H	V	S	A	V	.	.	.	P	N	D	Q	X	G	R	I	T	S	L	K	T	R	G	A	V	A	F	F	G	D	L	G	Y	E	.	.	.	.	.	L	D	I	T
Template Known Secondary structure							S			.	.	.	.	.	.													T	T	T	S		G	G	G								S	.	.	.	S		T	T	T														T	S	S						.	.	.	.	.	S		S	T
Template Predicted Secondary structure										.	.	.	.	.	.																													.	.	.																											.	.	.	.	.
Template SS confidence
		544	.	.	.	.	.	550	.							.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.				580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.						.	.	.	.
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	D	G	D	A	E	T	I	A	H	F	A	R	M	T	T	V	F	T	T	L	K	P	Y	L	K	E
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		K	X	.	.	A	P	T	E	L	D	Q	V	K	K	Q	V	A	F	Y	K	C	Y	R	Q	L	F	Q	F
Template Known Secondary structure		T		.	.																		T
Template Predicted Secondary structure				.	.
Template SS confidence
		610	.			.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.