Job Description P32138 Confidence 99.20% Date Thu Jan 5 11:49:24 GMT 2012 Rank 23 Aligned Residues 174 % Identity 14% Template c3lrmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase 1; PDBTitle: structure of alfa-galactosidase from saccharomyces cerevisiae with2 raffinose Resolution 2.70 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																		.	.	.
Query SS confidence																						.	.	.	.	.																		.	.	.
Query Sequence		G	R	Q	P	E	L	P	D	W	I	Y	D	G	V	T	L	G	I	Q	G	.	.	.	.	.	G	T	E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	.	.	.	K	V	N	G	I	W	A	Q	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	E	N	Y	P	Q
Query Conservation																						.	.	.	.	.																		.	.	.
Alig confidence									.	.	.	.	.									.	.	.	.	.																		.	.	.																				.	.	.	.	.
Template Conservation									.	.	.	.	.																																																					.	.	.	.	.
Template Sequence		G	L	G	L	T	P	Q	.	.	.	.	.	M	G	W	D	N	W	N	T	F	A	C	D	V	S	E	Q	L	L	L	D	T	A	D	R	I	S	D	L	G	L	K	D	M	G	Y	K	Y	I	I	L	D	D	C	W	S	S	G	R	D	S	D	G	.	.	.	.	.	F	L	V	A	D	E	Q	K	F	P	N
Template Known Secondary structure		S			S	S			.	.	.	.	.					S					T	T																	T	T		G	G	G	T								S	S							T	T	S	.	.	.	.	.						T	T	T		T	T
Template Predicted Secondary structure									.	.	.	.	.																																																					.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.
			316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	Y	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	V	D	L	T	N	P	E	A	Y	A	W	F	K	E	V	I	K	K	N	M
Query Conservation		.
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		G	M	G	H	V	A	D	H	L	H	N	N	S	F	L	F	G	M	Y	S	S	A	G	E	Y	T	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	P	G	S	L	G	R	E	E	E	D	A	.	Q	F	F
Template Known Secondary structure													T	T									S	S	S	B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B			T	T							.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																																				.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.							.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		I	E	L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P	T	D	T	Y	L	H	N	G	V	S	A	E	I	M	H	N	A	W	P	A	L	W	A	K	C	N	Y	E	A	L	E	E	T	G	K	L	G	E	I	L	F	F	M	R	A	G	S	T	G	S	Q	.	.	.	.	.	.	K	Y	S	T	M	M
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																											.	.	.																.	.	.	.	.	.						.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.																											.	.	.																											.
Template Sequence		A	N	N	R	V	D	Y	L	K	Y	A	N	C	.	.	.	.	.	.	.	.	.	.	.	Y	N	K	G	Q	F	G	T	P	E	I	S	Y	H	R	Y	K	A	M	S	D	A	L	N	K	T	.	.	.	G	R	P	V	F	Y	S	L	C	N	W	G	Q	D	L	T	F	Y	W	G	S	G	I	A	N	S	.
Template Known Secondary structure				T	T									T	.	.	.	.	.	.	.	.	.	.	.	T		T	T			S	S																		T	.	.	.	T	S								S	T	T	T	T	T					S	T	T	T		S		.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																											.	.	.																											.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.												.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		469			470	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		W	.	.	A	G	D	Q	N	V	D	W	S
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		W	R	M	S	G	D	V	T	A	E	F	T
Template Known Secondary structure					S	S		B		S		S	S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions