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Job DescriptionP32138
Confidence98.03%DateThu Jan 5 11:49:24 GMT 2012
Rank52Aligned Residues142
% Identity10%Templatec3edeB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:cyclomaltodextrinase; PDBTitle: structural base for cyclodextrin hydrolysis
Resolution1.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.... .....310.... .....320.........330......
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Query Sequence  GGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMW. . NWKWNSENYP. . . QLDSRIKQWNQEGVQFLAYINP.
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Template Sequence  GDIRGTIDHLDYIAGLGFT. . QLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLS
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   145....150.........160... ......170.........180.........190.........200.........210.........220..
 
   337..340.........350.........360.........370.... .....380.........390......
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Query Sequence  YVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGV. . . . . . . . . . . . . . . . . . . . VDLTNPEAYAWFKEVIKKNMIE
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Template Sequence  HIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEY
Template Known Secondary structure  B

TT
GGGGS
SSTTSBGGGGS

B



GGGGS
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BB
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   223......230.........240.........250.........260.........270.........280.........290.........300..
 
   397..400......
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Query Sequence  LGCGGWMADF
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Template Sequence  AGLSGLRIDT
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   303......310..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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