Job Description P32138 Confidence 99.70% Date Thu Jan 5 11:49:24 GMT 2012 Rank 17 Aligned Residues 237 % Identity 14% Template c3cc1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative alpha-n-acetylgalactosaminidase; PDBTitle: crystal structure of a putative alpha-n-acetylgalactosaminidase2 (bh1870) from bacillus halodurans c-125 at 2.00 a resolution Resolution 2.00 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300						.	.	.	.	.
Predicted Secondary structure																														.	.	.																				.	.																			.	.	.	.	.
Query SS confidence																														.	.	.																				.	.																			.	.	.	.	.
Query Sequence		L	E	K	L	T	A	L	L	G	R	Q	P	E	L	P	D	W	I	Y	D	G	V	T	L	G	I	Q	G	.	.	.	G	T	E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	K	V	.	.	N	G	I	W	A	Q	D	W	S	G	I	R	M	T	S	F	G	K	.	.	.	.	.	R	V	M	W	N
Query Conservation																														.	.	.																				.	.																			.	.	.	.	.
Alig confidence										.	.	.	.	.			.	.	.											.	.	.																				.	.																			.	.	.	.	.
Template Conservation										.	.	.	.	.			.	.	.
Template Sequence		V	N	R	L	S	A	L	T	.	.	.	.	.	P	P	.	.	.	X	G	W	N	S	W	D	C	Y	G	A	S	V	T	E	E	E	V	L	G	N	A	E	Y	X	A	N	H	L	K	K	Y	G	W	E	Y	I	V	V	D	I	Q	W	Y	E	P	T	A	N	N	P	F	A	P	L	C	X	D	E	Y	G	R
Template Known Secondary structure			S		B	T	T	B		.	.	.	.	.			.	.	.					S					T	T																		T	G	G	G	T								S		T	T		T	T				T	T					B		T	T	S
Template Predicted Secondary structure										.	.	.	.	.			.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10						.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		306	.	.	.	310	.	.	.	.	.							.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		W	K	W	N	S	E	N	Y	P	Q	.	.	.	.	.	.	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	Y	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	V	D	L	T	N
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	P	A	T	N	R	F	P	S	A	K	N	G	A	G	F	K	P	L	S	D	A	I	H	D	L	G	L	K	F	G	I	H	I	X	R	G	I	P	R	Q	A	V	Y	E	N	S	P	V	L	G	S	T	K	T	A	R	E	I	A	H	T	N	S	I	C	P	W	N	T	D	X	Y	G	V	D	P	T	K
Template Known Secondary structure		B				T	T	T		G	G	G	T	T	T	T	T	T										T	T									S	S									T		B		T	T	S	S		B							T	T			B	T	T	B		S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	A	Y	A	W	F	K	E	V	I	K	K	N	M	I	E	L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P	T	D	T	Y	L	H	N	G	V	S	A	E	I	M	H	N	A	W	P	A	L	W	A	K	C	N	Y	E	A	L	E	E	T	G	K	L	G	E	I	L	F	F	M	R	A	G	S	T
Query Conservation
Alig confidence													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		E	G	A	Q	S	Y	Y	N	S	L	F	.	E	L	Y	A	Q	W	G	V	D	F	V	K	V	D	D	I	A	A	S	R	L	Y	D	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	I	K	X	I	Q	R	A	I	Q	A	C	G	R	.	P	X	V	L	S	L	S	P	G	P	A	P
Template Known Secondary structure		T	T										.						T	T								S		S		B	T	T	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	S	S	S	.										S
Template Predicted Secondary structure													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.															.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	Q	K	Y	S	T	M	M	W	A	G	D	Q	N	V	D	W	S	L	D	D	G	L	A	S	V	V	P	A	A	L	S	L	A	M	T	G	H	G	L	H	H	S	D
Query Conservation
Alig confidence							.	.	.	.	.											.	.	.
Template Conservation							.	.	.	.	.											.	.	.
Template Sequence		I	K	W	R	I	.	.	.	.	.	T	D	D	F	W	D	D	W	S	L	.	.	.	L	Y	Q	X	F	E	R	C	E	V	W	E	K	H	I	G	T	G	H	W	P	D
Template Known Secondary structure					T	T	.	.	.	.	.	S		S			S					.	.	.													T	S	S			S	S
Template Predicted Secondary structure							.	.	.	.	.											.	.	.
Template SS confidence
		223	.	.	.	.						.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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