Job Description P32138 Confidence 99.21% Date Thu Jan 5 11:49:24 GMT 2012 Rank 22 Aligned Residues 230 % Identity 16% Template c3a5vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of alpha-galactosidase i from mortierella vinacea Resolution 2.00 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																			.	.	.								.
Query SS confidence																						.	.	.	.	.																			.	.	.								.
Query Sequence		G	R	Q	P	E	L	P	D	W	I	Y	D	G	V	T	L	G	I	Q	G	.	.	.	.	.	G	T	E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	K	.	.	.	V	N	G	I	W	A	Q	.	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	E	N	Y	P
Query Conservation																						.	.	.	.	.																			.	.	.								.
Alig confidence									.	.	.	.	.									.	.	.	.	.																			.	.	.								.												.	.	.	.	.
Template Conservation									.	.	.	.	.																																																						.	.	.	.	.
Template Sequence		G	L	A	I	T	P	Q	.	.	.	.	.	M	G	W	N	T	W	N	K	Y	G	C	N	V	D	E	Q	L	I	L	D	A	A	K	A	I	A	S	S	G	L	K	D	L	G	Y	N	Y	V	I	I	D	D	C	W	Q	K	N	E	R	E	S	S	K	.	.	.	.	.	T	L	L	A	D	P	T	K	F	P
Template Known Secondary structure		S			S	S			.	.	.	.	.					S					G	G	G																	T					T								S	S		B		S	S			T	T	S	.	.	.	.	.				B		T	T	T		T
Template Predicted Secondary structure									.	.	.	.	.																																																						.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.
		315		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		Q	.	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	Y	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	V	D	L	T	N	P	E	A	Y	A	W	F	K	E	V	I	K	K	N
Query Conservation			.
Alig confidence			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		R	G	I	K	P	L	V	D	D	I	H	N	L	G	L	K	A	G	I	Y	S	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	L	T	C	G	G	H	I	A	S	L	G	Y	E	D	I	D	A	.	K	T
Template Known Secondary structure		T												T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S		B			T	T							.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																																				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.							.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.
Query Sequence		M	I	E	L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P	T	D	T	Y	L	H	N	G	V	S	A	E	I	M	H	N	A	W	P	A	L	W	A	K	C	N	Y	E	A	L	E	E	T	G	K	L	G	E	I	L	F	F	M	R	A	G	S	T	G	S	Q	.	.	.	.	.	.	K	Y	S	T	M
Query Conservation																																																																							.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																			.	.	.	.	.											.	.	.																.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.																			.	.	.	.	.											.	.	.
Template Sequence		W	A	K	W	G	I	D	Y	L	K	Y	D	.	.	.	.	.	.	N	C	Y	N	Q	G	Q	S	G	T	P	K	L	S	Y	D	R	Y	.	.	.	.	.	K	A	M	G	N	A	L	N	K	T	.	.	.	G	R	P	M	L	Y	S	L	C	N	W	G	E	D	G	P	W	N	F	A	S	T	I	S	N	S
Template Known Secondary structure						T								.	.	.	.	.	.		T	T		T	T			S	S									.	.	.	.	.										T	.	.	.		S								S	T	T	T	T						S	T	T	T		S
Template Predicted Secondary structure														.	.	.	.	.	.																			.	.	.	.	.											.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		468	.			470	.	.	.	.	.	.	.	.	.	480	.	.																		.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	W	.	.	A	G	D	Q	N	V	D	W	S	L	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	S	V	V	P	A	A	L	S	L	A	M	T	G	H	G	L	H	H	S	D	I	G	G	Y	T	T	L	F	E	M	K	R	S	K	E	L	L	L	R	W	C	D	F	S
Query Conservation				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	W	R	I	S	G	D	V	Y	D	N	F	N	R	P	D	P	A	C	P	C	T	T	Y	D	C	V	L	A	G	F	R	C	S	V	M	N	I	I	N	K	A	V	A	V	S	Q	K	A	R	S	G	G	W	N	D	L	D	M	L	E	V	G	N	G	G	M	N	Q	E	E	Y	R	V	H	Y	T	I	W	A
Template Known Secondary structure		.				S	S		B		S		S	S				T	T	S				S	S			S				S		B													G	G	G		B	T	T	B							B		T	T	S	S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		529	530	.		.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	F	T	.	P	M	M
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		A	L	K	S	P	L	I
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions