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Job DescriptionP32138
Confidence98.14%DateThu Jan 5 11:49:24 GMT 2012
Rank47Aligned Residues170
% Identity17%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.. .......320.........330...... ...
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Query Sequence  GGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSEN. . YPQLDSRIKQWNQEGVQFLAYINP. YVA
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Template Sequence  GDLKGITSKLDYLQKLGVM. . AIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTS
Template Known Secondary structure 

TTT
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TTTTSS
S
GGG

TTT


SB

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   28.30.........40...... ...50.........60.........70.........80.........90.........100.....
 
   340.........350. ........360.........370.........380.........390.....
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Query Sequence  SDKDLCEEAAQH. . . . . . . . . . . . . . . . . . . . . . . . GYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMI
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Template Sequence  DEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWI.
Template Known Secondary structure  TTS
TTSGGGGGB
SS

S
B
TTSSBSTTTT
SS
TTS
BB
TT
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   106...110.........120.........130.........140.........150.........160.........170.........180....
 
   396...400.........410.........420.........430.....
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Query Sequence  ELGCGGWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAK
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Template Sequence  DKGIGGFRMDVIDMIGKIPAQHIVSNGPKLHAYLKEMNAA
Template Known Secondary structure  TTT

TTGGGTT
BGGGTB
SS
TT
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   185....190.........200.........210.........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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