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Job DescriptionP32138
Confidence98.23%DateThu Jan 5 11:49:24 GMT 2012
Rank40Aligned Residues148
% Identity15%Templatec2ze0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-glucosidase; PDBTitle: alpha-glucosidase gsj
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.... .....320.........330...... ...
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Query Sequence  GGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSENYP. . QLDSRIKQWNQEGVQFLAYINP. YVA
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Template Sequence  GDLRGIIEKLDYLVELG. . VDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVINHTS
Template Known Secondary structure 

TT..







TTTT
S
S
GGG

TT

SB

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   28.30.........40.... .....50.........60.........70.........80.........90.........100.....
 
   340.........350 .........360.........370.........380.........390
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Query Sequence  SDKDLCEEAAQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . HGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVI
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Template Sequence  DEHPWFIESRSSRDNPKRDWYIWRDGKDGREPNNWESIFGGSAWQYDERTGQYYLHIFDVKQPDLNWENSEVRQALYEMV
Template Known Secondary structure  TTS
SSSTTGGGB


BTTB
SS

TTSSBSTTTT
SS
TT

BB
TT
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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   391........400.........410...
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Query Sequence  KKNMIELGCGGWMADFGEYLPTD
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Template Sequence  NWWL. DKGIDGFRIDAISHIKKK
Template Known Secondary structure  .T

SGGGSS

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   186... 190.........200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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