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Job DescriptionP32138
Confidence33.01%DateThu Jan 5 11:49:24 GMT 2012
Rank189Aligned Residues127
% Identity20%Templatec2yl8A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-n-acetylhexosaminidase; PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280.........290.........300.........310... ...
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Query Sequence  LGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSENY. . . . . . . . . . . . . . . . . . . . . . PQL
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Template Sequence  GRKYFSPEQLKEIIDKAKHYGYTDLHLLVGNDGLRFMLDDMSITANGKTYASDDVKRAIEKGTNDYYNDPNGNHLTESQM
Template Known Secondary structure  TTS


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Query Sequence  DSRIKQWNQEGVQFLAYINP. . YVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNM
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Template Sequence  TDLINYAKDKGIGLIPTVNSPGHMDAILNAMKEL. . . . . . . . . GIQNPNFSYFGKKSARTVDLDNEQAVAFTKALIDKYA
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   275....280.........290.........300........ .310.........320.........330.........340.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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