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Job DescriptionP32138
Confidence97.55%DateThu Jan 5 11:49:24 GMT 2012
Rank90Aligned Residues89
% Identity10%Templatec2x4bA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:limit dextrinase; PDBTitle: barley limit dextrinase in complex with beta-cyclodextrin
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   314. ....320.........330...... ...340..... ....350.........360.........370.........380.
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Query Sequence  PQ. . . . . . . LDSRIKQWNQEGVQFLAYINP. YVASDKDLC. . . . EEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPE
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Template Sequence  PDGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLDSSGPCGISSVLDKIVPGYYVRRDTNGQIENSAAMNN. . . TASEHFM
Template Known Secondary structure  SSSTTT


SB
S

SS
STT

STTTSB
B
TTS
B

TTSSSB...B
TTS
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   373......380.........390.........400.........410.........420.........430.........440.. .......
 
   382.......390.........400.....
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Query Sequence  AYAWFKEVIKKNMIELGCGGWMAD
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Template Sequence  VDRLIVDDLLNWAVNYKVDGFRFD
Template Known Secondary structure  S


T
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   450.........460.........470...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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