Job Description P32138 Confidence 20.64% Date Thu Jan 5 11:49:24 GMT 2012 Rank 215 Aligned Residues 95 % Identity 20% Template c2wvsD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:alpha-l-fucosidase; PDBTitle: crystal structure of an alpha-l-fucosidase gh29 trapped2 covalent intermediate from bacteroides thetaiotaomicron in3 complex with 2-fluoro-fucosyl fluoride using an e288q4 mutant Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																							.	.																												.	.	.	.
Query SS confidence																							.	.																												.	.	.	.
Query Sequence		C	Q	K	K	L	D	T	M	R	N	A	G	V	K	V	N	G	I	W	A	Q	.	.	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	E	N	Y	P	Q	.	.	.	.	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	Y	V	A	S	D
Query Conservation																							.	.																												.	.	.	.
Alig confidence																							.	.												.	.	.	.	.	.	.										.	.	.	.																							.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		A	K	K	W	A	K	M	A	K	E	M	G	T	K	Y	V	K	I	T	T	K	H	H	E	G	F	C	L	W	P	S	K	Y	T	.	.	.	.	.	.	.	K	Y	T	V	A	N	T	P	Y	K	R	D	I	L	G	E	L	V	K	A	Y	N	D	E	G	I	D	V	H	F	Y	F	S	V	M	.	.	.	.
Template Known Secondary structure													T		S									T	T			B	S	S			T	T		.	.	.	.	.	.	.	S		B	G	G	G	S	T	T		S													T	T									S	S	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.																	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	V	D	L	T	N	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	A	W	F	K	E	V	I	K	K	N	M	I	E	L	.	G	C	G	G	W	M	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	S	N	P	D	Y	R	Y	D	I	K	S	K	E	D	S	I	A	F	S	R	F	L	E	F	T	D	N	Q	L	K	E	L	A	T	R	Y	P	T	V	K	D	F	W	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		T	T			S	S			S																										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																				183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		405	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	T
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		229	230	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions