Job Description P32138 Confidence 97.88% Date Thu Jan 5 11:49:24 GMT 2012 Rank 61 Aligned Residues 146 % Identity 14% Template c2wcsA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: crystal structure of debranching enzyme from nostoc2 punctiforme (npde) Resolution 2.80 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340
Predicted Secondary structure																												.																																																	.
Query SS confidence																												.																																																	.
Query Sequence		G	G	T	E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	K	V	N	G	I	W	A	Q	.	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	E	N	Y	P	Q	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	.	Y	V	A	S
Query Conservation																												.																																																	.
Alig confidence																					.	.						.																																																	.
Template Conservation																					.	.
Template Sequence		G	D	L	W	G	I	M	E	D	L	D	Y	I	Q	N	L	G	I	N	.	.	A	I	Y	F	T	P	I	F	Q	S	A	S	N	H	R	Y	H	T	H	D	Y	Y	Q	V	D	P	M	L	G	G	N	E	A	F	K	E	L	L	D	A	A	H	Q	R	N	I	K	V	V	L	D	G	V	F	N	H	S	S	R
Template Known Secondary structure										T								T			.	.					S						S	T	T		T	T	S									G	G	G	T															T	T										S	B			T
Template Predicted Secondary structure																					.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		341	.	.	.	.	.	.	.	.	350									.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.									.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		D	K	D	L	C	E	E	A	A	Q	.	.	.	.	.	.	.	.	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	.	.	.	.	.	.	.	.	V	D	L	T	N	P	E	A	Y	A	W	F	K	E	V	I	K	K	N	M	I	E	L	G	C	G	G	W	M	A
Query Conservation												.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.																					.
Template Conservation																																																																								.
Template Sequence		G	F	F	F	F	H	D	V	L	E	N	G	P	H	S	P	W	V	N	W	F	K	I	E	G	W	P	L	S	P	Y	N	G	E	F	P	A	N	Y	V	G	W	A	G	N	R	A	L	P	E	F	N	H	D	N	P	E	V	R	E	Y	I	M	E	I	A	E	Y	W	L	.	K	F	G	I	D	G	W	R	L
Template Known Secondary structure		T	S										G	G	G		T	T	G	G	G	B		B		S	S	S			S	S			S	S			S	B		B	G	G	G		T	T	S	B	B	B		T	T	S																.			T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.
		405	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	G	E	Y	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	P	F	E	I	K
Template Known Secondary structure			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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