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Job DescriptionP32138
Confidence100.00%DateThu Jan 5 11:49:24 GMT 2012
Rank4Aligned Residues614
% Identity22%Templatec1xsiF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:putative family 31 glucosidase yici; PDBTitle: structure of a family 31 alpha glycosidase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.... .....60.........70.........80.........90........
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Query Sequence  LHFQQRLILTHSKDNPCLWIGSGIADIDMFRGN. . . FSIKDKLQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISAD
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Template Sequence  LDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSK. . . . GEFWSLDFL
Template Known Secondary structure  SSS

TTS
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SSTT
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   48.50.........60.........70.........80.........90.........100.........110.... .....120...
 
   99100.........110.... .....120.........130.........140.........150.........160.........170
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Query Sequence  DQGRLLLELQNDNLNH. . . . . . . . NRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCK
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Template Sequence  RNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQ. . . . . . . . . . .
Template Known Secondary structure  TTTTSTTTT

TT



S
SS
TT






SSSS
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   124.....130.........140.........150.........160.........170.........180.........190..
 
   171........180.........190.........200.........210 .........220.........230.........240........
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Query Sequence  ENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAP. . EYHELALWEDKATLRFECADTYISLLEKLTALLGRQPE
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Template Sequence  . . . . . . . . . AYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPAL
Template Known Secondary structure  .........
STTS

SS

SSSSTTSSS
SS




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   193......200.........210.........220.........230.........240.........250.........260...
 
   249250.........260. .. ......270.........280........ .290.........300.........310.........320....
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Query Sequence  LPDWIYDGVTLGI. QG. . GTEVCQKKLDTMRNAGVKVNGIWAQ. DWSGIRMTSFGKRVMWNWKWNSENYPQLDSRIKQWN
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Template Sequence  PPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWC. . . . . . . DFEWDPLTFPDPEGMIRRLK
Template Known Secondary structure 

GGGGS

SSS


TT




GGGB
TT

S.......S

B
TTT
S
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   264.....270.........280.........290.........300.........310...... ...320.........330......
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  QEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMA
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Template Sequence  AKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKL. KGLVAMGVDCFKT
Template Known Secondary structure  TTT

S
TTST
B
B
TTSSB

B
SSSTTBB
TTS.TT

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   337..340.........350.........360.........370.........380.........390.........400.. .......410.....
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
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Query Sequence  DFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLDDGLA
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Template Sequence  DFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPV. HWGGDCYANYES. . . MA
Template Known Secondary structure 






SSSB
TT


TTT
GGG

S
B
TTGGGS

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   416...420.........430.........440.........450.........460.........470....... ..480......... 490.
 
   485....490.........500.........510.........520.........530.........540.........550.........560....
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Query Sequence  SVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFARMTTV
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Template Sequence  ESLRGGLSIGLSGFGFWSHDIGGFEN. . . . TAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAY. . DDESCDVVRFFTQL
Template Known Secondary structure  TTT



BTT
SBS....


TSSS

SSS


GGGT..
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   492.......500.........510....... ..520.........530.........540.........550. ........560.....
 
   565....570.........580.........590.........600.........610.........620.........630.........640....
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Query Sequence  FTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYTLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWTGEAF
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Template Sequence  KCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAG. DVQFYLPEGRWTHLWHNDEL
Template Known Secondary structure  T


S

TT
GGGTT

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TTT



SSS
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SSTTT

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   566...570.........580.........590.........600.........610.........620.... .....630.........640....
 
   645... .650.........660.........670........
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Query Sequence  RGGE. VTVNAPIGKPPVFYRADSEWAALFASLKSI
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Template Sequence  DGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPD
Template Known Secondary structure  SS

TT



SS
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   645....650.........660.........670.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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