Job Description P32138 Confidence 94.97% Date Thu Jan 5 11:49:24 GMT 2012 Rank 131 Aligned Residues 146 % Identity 14% Template c1mwoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha amylase; PDBTitle: crystal structure analysis of the hyperthermostable2 pyrocoocus woesei alpha-amylase Resolution 2.20 Å

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310									.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																												.	.																				.	.	.	.	.	.	.	.					.	.	.
Query SS confidence																												.	.																				.	.	.	.	.	.	.	.					.	.	.
Query Sequence		E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	K	V	N	G	I	W	A	Q	D	W	S	.	.	G	I	R	M	T	S	F	G	K	R	V	M	W	N	W	K	W	N	S	.	.	.	.	.	.	.	.	E	N	Y	P	.	.	.	Q	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A
Query Conservation																												.	.																				.	.	.	.	.	.	.	.					.	.	.
Alig confidence																		.	.									.	.																				.	.	.	.	.	.	.	.					.	.	.
Template Conservation																		.	.
Template Sequence		D	H	I	R	S	K	I	P	E	W	Y	E	A	G	I	S	.	.	A	I	W	L	P	P	P	S	K	G	M	S	G	G	Y	S	M	G	Y	D	P	Y	D	Y	F	D	L	G	E	Y	Y	Q	K	G	T	V	E	T	R	F	G	S	K	E	E	L	V	R	L	I	Q	T	A	H	A	Y	G	I	K	V	I	A
Template Known Secondary structure															T			.	.								S			T	T	G	G	G			S	S	S				T	T		S	S		S		B	T	T	B	S	S		S	S																T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		333	.	.	.		.	.	.	340	.	.	.	.	.																	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.				.
Predicted Secondary structure						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query SS confidence						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query Sequence		Y	I	N	P	.	Y	V	A	S	D	K	D	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	A	A	Q	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	V	D	L	T	N	P	E	A	Y	A	W	F	K	E	V	I	K	.	.	.	K
Query Conservation						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Alig confidence						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Template Conservation
Template Sequence		D	V	V	I	N	H	R	A	G	G	D	L	E	W	N	P	F	V	G	D	Y	T	W	T	D	F	S	K	V	A	S	G	K	Y	T	A	N	Y	L	D	F	H	P	N	E	L	H	C	C	D	E	G	T	F	G	G	F	P	D	I	C	H	H	K	E	W	D	Q	Y	W	L	W	K	S	N	E	S	Y	A	A
Template Known Secondary structure						S	B										T	T	T	T								T	T		T	T		S	S				G	G	G	B	S	S	S	S	S		S			S				T	T			B	B		T	T	S								T	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	I	E	L	G	C	G	G	W	M	A	D	F	G	E	Y	L	P	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	R	S	I	G	F	D	G	W	R	F	D	Y	V	K	G	Y	G	A	W
Template Known Secondary structure						T	T							T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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