Job Description P32138 Confidence 98.83% Date Thu Jan 5 11:49:24 GMT 2012 Rank 31 Aligned Residues 119 % Identity 15% Template c1ktbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: the structure of alpha-n-acetylgalactosaminidase Resolution 1.90 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.									.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.									.
Query Sequence		G	R	Q	P	E	L	P	D	W	I	Y	D	G	V	T	L	G	I	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	E	V	C	Q	K	K	L	D	T	M	R	N	A	G	V	.	.	.	K	V	N	G	I	W	A	Q	.	D	W	S	G	I	R	M	T	S	F	G	K	R	V	M	W
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.									.
Alig confidence									.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.									.												.	.	.	.	.
Template Conservation									.	.	.	.	.																																																																.	.	.	.	.
Template Sequence		G	L	A	R	T	P	P	.	.	.	.	.	M	G	W	L	A	W	E	R	F	R	C	N	V	N	C	R	E	D	P	R	Q	C	I	S	E	M	L	F	M	E	M	A	D	R	I	A	E	D	G	W	R	E	L	G	Y	K	Y	I	N	I	D	D	C	W	A	A	K	Q	R	D	A	E	G	.	.	.	.	.
Template Known Secondary structure		S			S	S			.	.	.	.	.					S					T	T				T	T	T		T	T	T	S	S	S														S	S					T								S	S		B		S	S			T	T	S	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.																																																																.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		305	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		N	W	K	W	N	S	E	N	Y	P	Q	.	L	D	S	R	I	K	Q	W	N	Q	E	G	V	Q	F	L	A	Y	I	N	P	Y	V	A	S	D	K	D	L	C	E	E	A	A	Q	H	G	Y	L	A	K	D	A	S	G	G	D	Y	L	V	E	F	G	E	F	Y	G	G	V	V	D	L	T	N	P	E	A	Y
Query Conservation													.
Alig confidence													.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	V	P	D	P	E	R	F	P	R	G	I	K	A	L	A	D	Y	V	H	A	R	G	L	K	L	G	I	Y	G	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	L	T	C	G	G	Y	P	G	T	T	L
Template Known Secondary structure					B		T	T	T		T	T											T	T	T									B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S	S	B		B		G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																																			.	.	.	110	.	.	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	F	K	E	V	I	K	K	N	M	I	E	L	G	C	G	G	W	M	A	D	F	G
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		D	R	V	E	Q	D	A	.	Q	T	F	A	E	W	G	V	D	M	L	K	L	D	G	C
Template Known Secondary structure		G	G						.							T									T
Template Predicted Secondary structure									.
Template SS confidence
		120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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